Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0384 ATGGAAGACGGGCATAAGTTCCAGGAAGTTCCAAAGCCAAAATATGATTGTCTTTTATTTGATCTTGATGATACCCTTTATCCTTTTAGTTCTGGAGTTTCAGCGCAAGTAGCAAAACATATTGATGAGTATATGGTTCAAAAGCTTGGGATGGAGGCTGCCAAAGTTGCCGAATTAAACTATCCATTATATAAGATTTATGGGACAACGATGGCTGGTCTAAGGGCAATTGGCTATGACTTTGACTATGATGACTTTAATAGCAGTTTTGTTCATGGGAGATTGTCATATGAAGTGCTGCTGAAACCAGACCCTGTTCTCAGAGGCATTTTGCAAAGCCTGCCTGTTAGGAAACTTATTTTTACAAATGCAGACTCAAACCATGCAATTAGAGCGCTTAAAGCCCTTGGACTGGAGGACTGCTTTGAAAGTATTATAAGCTTTGACACTTTGAATCCGAATCCTTCTTATGATAAGGTTGGCAGTGAATCCAGATCAACAATCACTGCCGAAATTGACTTTTGTGAGCACATTCGCCGGCCTGATTCTGATTTGGTGCTTCCAAAGACCCCAGTAGTCTGCAAACCCTTTGATGATGCATTTGAAAATGCTTTCAAGTTAGCAGATATTGACCCTCAAAGAACATTGTTTTTTGATGACAGCATCCGCAATTTATTGACAGCCAAACGCTTGGGCCTCCACACAGTCGCGGTTGGTACGTCTGTTCGTACAACTGGAGTGGATCATGCACTAGAGAGTATTCATAATATCAGGGAGGCATTTCCTGAGCTTTGGGATGCTGACGAGAAGCATGAATTTGTTGTGCAATACAATGTTGGAATTGAAACATCAGTCAAAGCTTAG 864 0.412 MEDGHKFQEVPKPKYDCLLFDLDDTLYPFSSGVSAQVAKHIDEYMVQKLGMEAAKVAELNYPLYKIYGTTMAGLRAIGYDFDYDDFNSSFVHGRLSYEVLLKPDPVLRGILQSLPVRKLIFTNADSNHAIRALKALGLEDCFESIISFDTLNPNPSYDKVGSESRSTITAEIDFCEHIRRPDSDLVLPKTPVVCKPFDDAFENAFKLADIDPQRTLFFDDSIRNLLTAKRLGLHTVAVGTSVRTTGVDHALESIHNIREAFPELWDADEKHEFVVQYNVGIETSVKA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0384 287 SFLD C1.5.3: 5'-Nucleotidase Like 11 267 IPR010237 -
Aed5g0384 287 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 287 - -
Aed5g0384 287 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 190 238 IPR006439 -
Aed5g0384 287 SFLD Haloacid Dehalogenase 11 267 - -
Aed5g0384 287 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 237 IPR010237 -
Aed5g0384 287 Gene3D - 82 265 IPR023214 -
Aed5g0384 287 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 287 - -
Aed5g0384 287 SUPERFAMILY HAD-like 14 262 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0384 Aed-Chr5 2747313 2750372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0384 K07025 - gmx:100807717 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1237 1 11819335 11823616 Aed5g0384 5 2747313 2750372 PCT