Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1237 ATGGATGCGTTACATGCTTCAAAAGCTTTTCATTGTACAAGACTTACGGGACAACCATGGCAGGCTATTGGCTATGACTTTGACTATGATGACTTTCATGGCTTTGTTCATGGGAGATTGCCGTATGATATACTGAAATCTGACTCTGTTCTCAGGGGAATTTTGCTAAGCATGCCTGTTCAAAAAATTGTTTTTACAAACTCAGACAAGGCGCATGCAAGTAGAGTGCTTCACAGGCTTGGATTGGAGGATTGCTTTGAAAGAGTTATAAGCTTTGAGACCCTGAATTCCTCCAATGAAGATAAACCAAGTTCCACAGGGATGATTTTTGATTTTTATGAGTACATTCGAAGGTCTGATTCTGATATCGTGCTTCCAAGGACCCCGGTTGTGTGCAAACCCTTTCAAGATGCATTTGAAAAGGTTTTCAATATGGCAGATATTGACCCTCAAAGAACATTATTCTTTGATGACAGTCTCCGAAATTTACAAACGGGCAAATCCTTGGGCCTCCACACAGTCTTGAATGGGACAGATACCAACGTTAGCAGTGACCATGAATTAGATGTATTCTACTTTGACATGTGGGTGTATTGA 597 0.407 MDALHASKAFHCTRLTGQPWQAIGYDFDYDDFHGFVHGRLPYDILKSDSVLRGILLSMPVQKIVFTNSDKAHASRVLHRLGLEDCFERVISFETLNSSNEDKPSSTGMIFDFYEYIRRSDSDIVLPRTPVVCKPFQDAFEKVFNMADIDPQRTLFFDDSLRNLQTGKSLGLHTVLNGTDTNVSSDHELDVFYFDMWVY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1237 198 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 20 183 - -
Aed1g1237 198 Gene3D - 27 193 IPR023214 -
Aed1g1237 198 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 20 183 - -
Aed1g1237 198 SUPERFAMILY HAD-like 21 179 IPR036412 -
Aed1g1237 198 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 175 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1237 Aed-Chr1 11819335 11823616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1237 K07025 - gmx:100790444 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1237 1 11819335 11823616 Aed1g1237 1 11819335 11823616 ECH
Aed1g1237 1 11819335 11823616 Aed5g0384 5 2747313 2750372 PCT