Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0343 ATGGGAGCTATTGCTGGAGAGGAGCTGCTGAAATGGGAGAAGATGCAGCAAGGAGCGAGTGGTCGCGAAGAGAAGATTCTGGTGTCAATAAGGCTGAGGCCTTTGAATGACAAGGAAATTGCTGCTAATGAATCAGCAGACTGGGAATGCATTAATGATACTACCATCTTGTACCGGAACACACTGCGTGAGGGTTCCACATTTCCAAGCGCCTACACATTTGACAACGTATTTCGGGGTGATTGTGTCACAAGGCAGGTATATGAGGAAGGAGCCAAAGAAGTTGCTCTTTCACTTGTCAGTGGAATTAACTCAAGTATTTTTGCATACGGGCAAACAAGTAGTGGAAAGACATACACGATGGTTGGAATAACTGAATACGCTGCTGCAGATATTTTTGACTATATAAAGAGGCATGAAGAAAGAGCATTTATATTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTAGAGACCTCCTCAGCACTGACAACACTCCACTTAGACTACGTGATGATCCTGAGAAAGGGCCCATTTTAGAGAAACTCACAGAGGAGACTCTACGGGACTGGGAGCACTTAAAAGAGCTTATAGCCTTCAGTGAAGCTCAGAGACAAGTGGGGGAGACATACCTAAATGAAAAGAGTTCTAGATCTCACCAAATTATCAGATTGACAATGGAGAGTTCTGCCAGAGAATTCTTGGGCAAAGGCAACTCAGCCACCCTAGTGGCTAGTGTGAATTTAGTTGATTTGGCAGGGAGTGAGCGCGCATCTCAGGCATCATCTGCTGGGATGAGATTAAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTGGAACAGTTATTCGCAAGCTGAGTGAACTATACTGCCCTTGTGAATTTGCGTATCCTAGTATTGAAGAAGGTTTGCATAATATGGAGAAGGAGAATAGGGAGCTAACCAAGCAACGTGACCTTGCTCAATCAAGGGTTGAGGATTTGCTGCGCATGGTCGGAAAGGAGCAGATATCTGGAAAAGTAGTTTCTATTCCGATGTGGAAGATATCTGGGAAGATGACTGTTCAGTATCAGAGTCATCGAGCATTTGTGGTCCTCACCATCCTAATACACACATTAGAGGGTTCAACAATCCTCATTATAATGATGGAGATAGTGGAAGTAATTTTGATGGAAATATCTTCACATTTGAATGAAGATACTGGAGACAATCAAATCCAAGGAAATTCAACATTGCTGGAGCAGAGACTGCATGATGTACAGTCAACCATTGATTCCCTTGTATGTCATTCCCCTGATGAACAGTCTTCACAGGTCATGTCAGGAAATAATAAGAACCTTAGATTAACTAGAAGCTGGAGTTGTACGGAATATCACATGACTGGTTCTCCTGAGTCAGTAGGAGGAATACAGAGGACTCCAGCATATGGATATGATAAAGGATTTCCTGGAAGGCCAGATGGTTTGCAGAGAAAGTTTCCTCCACTAAATTATGATGGTTCCACAAGATTGTTAAGGAATGGTTCTCAGTCTTCCATGGGAAGTCTTTCGGTGGATGATCGAGCCAACAGCATCAGAACATCTGCTGATGAGGATATTACTAGCATCCAGACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACAAGAATATCAGAAGCAGCTTGGTGATGGTCAGGATCAGGAGGCAGGAAGAAAGAATGTGAAAGATGTAGGTGTGGATCCGATGTTGGAGGCGCCTGGAACTCCTTTAGATTGGTCTCTGCAATTCAAGAAACAGCAAAAAGAGATAATCGAACTGTGGCAATCTTGCTGTGTACCATTGACCCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCCAACAGACTCCATTTACATGGAGGTAGAACTTAGAAGACTATCCTTCCTCAAAGAAACATTTTCTGATGGAAACCAGTCTGTGAGAAATAGTCAGACAATGACACTAGCTTCAAGCGTGAAAGGTCTTCGGCGAGAAAGAGGAATGCTTGTGAAGCTTATGCAGAGGAGGCTCTCGGAGAAGGAGAGAATAAGGCTATATGAGGAATGGGGCATTGCATTGGATTCAAAGCGCAGAAGGGTTCAACTAGCGAACCGTTTATGGAGCGAAAATGATATGAACCACGTAATGCAGAGTGCTACAATAGTTGCAAAGTTAGTGAGGTTCTGGGAACGAGGCAAGGCCCTCAAGGAGATGTTTGGGCTTAGCTTCACACCCCAACTCACGGGCCGAAGATCCTCTTATCCATGGAAAAATAGCCCAGCCTCTGTTTTATAG 2310 0.4342 MGAIAGEELLKWEKMQQGASGREEKILVSIRLRPLNDKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDNVFRGDCVTRQVYEEGAKEVALSLVSGINSSIFAYGQTSSGKTYTMVGITEYAAADIFDYIKRHEERAFILKFSAIEIYNEIVRDLLSTDNTPLRLRDDPEKGPILEKLTEETLRDWEHLKELIAFSEAQRQVGETYLNEKSSRSHQIIRLTMESSAREFLGKGNSATLVASVNLVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLSELYCPCEFAYPSIEEGLHNMEKENRELTKQRDLAQSRVEDLLRMVGKEQISGKVVSIPMWKISGKMTVQYQSHRAFVVLTILIHTLEGSTILIIMMEIVEVILMEISSHLNEDTGDNQIQGNSTLLEQRLHDVQSTIDSLVCHSPDEQSSQVMSGNNKNLRLTRSWSCTEYHMTGSPESVGGIQRTPAYGYDKGFPGRPDGLQRKFPPLNYDGSTRLLRNGSQSSMGSLSVDDRANSIRTSADEDITSIQTFVAGMKEMVKQEYQKQLGDGQDQEAGRKNVKDVGVDPMLEAPGTPLDWSLQFKKQQKEIIELWQSCCVPLTHRTYFFLLFRGDPTDSIYMEVELRRLSFLKETFSDGNQSVRNSQTMTLASSVKGLRRERGMLVKLMQRRLSEKERIRLYEEWGIALDSKRRRVQLANRLWSENDMNHVMQSATIVAKLVRFWERGKALKEMFGLSFTPQLTGRRSSYPWKNSPASVL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0343 769 PANTHER CENTROMERE PROTEIN E 308 345 - -
Aed5g0343 769 PRINTS Kinesin heavy chain signature 247 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g0343 769 PRINTS Kinesin heavy chain signature 102 123 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g0343 769 PRINTS Kinesin heavy chain signature 211 228 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g0343 769 SMART kinesin_4 23 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g0343 769 Coils Coil 300 334 - -
Aed5g0343 769 ProSitePatterns Kinesin motor domain signature. 246 257 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed5g0343 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 291 IPR027417 -
Aed5g0343 769 Pfam Domain of unknown function (DUF3490) 592 751 IPR021881 -
Aed5g0343 769 ProSiteProfiles Kinesin motor domain profile. 25 291 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g0343 769 PANTHER KINESIN-LIKE PROTEIN KIN-7F 308 345 - -
Aed5g0343 769 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 291 - -
Aed5g0343 769 Pfam Kinesin motor domain 31 291 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g0343 769 PANTHER KINESIN-LIKE PROTEIN KIN-7F 396 768 - -
Aed5g0343 769 Gene3D Kinesin motor domain 21 322 IPR036961 -
Aed5g0343 769 PANTHER CENTROMERE PROTEIN E 396 768 - -
Aed5g0343 769 PANTHER CENTROMERE PROTEIN E 6 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0343 Aed-Chr5 2405481 2413777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0343 23 291 Miscellaneous Gene Families AT5G06670 42.238 3.92e-53 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0343 K11498 - gmx:100820012 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0343 5 2405481 2413777 Aed5g0343 5 2405481 2413777 ECH
Aed5g0343 5 2405481 2413777 Aed11g1232 11 17513510 17521414 ECH