Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1232 ATGGGGTCTGTTGGAGGGGAAGAAGCAATTCAAGAGGCTTCAGGCCATGATGAGAGGATTCTTGTTTCTGTTCGTCTTCGTCCCCTCAATGAAAAAGAGCTTGCAAGAAATGATGTTTCAGATTGGGAATGCATCAATGACTCTACCATCATATACAGGAGCAACCTTTCAGCTTCTGACAGGTCACTCTACCCAACAGCATATTCCTTTGACAGTGTGTTCCGAACAGATTCTTCTACAAGGCAAGTCTATGAAAAAGCAGCTAAGGAAGTTGCTCTTTCCGTTGTCGGTGGCATCAACTCAAGCATTTTTGCATATGGACAAACAAGTAGTGGGAAGACATACACCATGAGTGGCATAACTGAATACACGGTAGCAGACATTTTTCACTACATAGAAAAGCACACGGAAAGAGAATTCATGTTGAAGTTTTCGGCAATTGAGATTTATAATGAATCTGTCAGGGACCTCCTTAGTCCAGACTGTACTCCTCTCAGACTTCTTGATGATCCAGAGAGAGGGACAGTTGTTGAGAGACTGACCGAGGAAACTATAAGAGACTGGAACCATTTTACAGAACTTATTTCTTTCTGTGAAGCTCAAAGGCAGATAGGGGAGACAGCACTGAATGAAGCAAGCTCCAGATCTCATCAAATTCTAAGACTGACCATTGAAAGTTGTGCACGTGAATTCCTTGGAAATGACAAGTCTAGCTCTCTTTCTGCTTCAGTGAATTTTGTTGATCTTGCTGGAAGCGAGCGAGCATCCCAAACCCATTCAGCTGGCACAAGATTGAAAGAGGGTTGCCACATAAATCGTAGCTTATTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACCCGCATATTGCAGTCATCGTTAGGAGGCAATGCTAGAACTGCTATCATCTGCACCATGAGCCCTGCCCGGAGCCATGTTGAACAAACCAGGAACACCCTCTTATTTGCAAGCTGTGCAAAAGAAGTGACAACTAATGCACAAGTGAATGTAGTAGTGTCTGATAAAGCACTAGTCAAGCAATTACAAAAAGAGTTGGCTAGACTGGAAGATGAATTGAGAAATTCAGTGCCATCCCAACTTACATCTGAGACTGCGGCATTGTTGAGAGAAAAAGACCGTCAAATTGATATGTTAAAGAAAGAGGTAAGAGAGCTGACCTTGCAGCGGGACCTTGCACATTCTCGAATTAGTGACATGCTCCAAGTGCATAGAGAAGATGCGGCTACAATAGAACTGGAAAGTATGGATCCTCAATATCCAAATTTACATACAAGAAGTTCATGGAACTTTGAAAATCAAAGAGAGAAGCCAAATGTATTAAGTCTAGATGGTGAAGAGAGTGTCAGGTCTTTTGATGCATCTCAATATTCAGATGGACATAGTTTTAGTTCTGATGACAACTTATTCCAACTCCCTGACCTTGAAAAGAATCTTCTGGTCAGAAGTTCTTCCCCAGGGCTTCCAGTCAAAAGGGCTGATGCTGTATCGAATAATTTGGATCAGAAACACGTTGAAGATCAGCATGAAAAGGACAATTGTAAGGAAGTTAGGTGCATCGAGTTAGTAGACGTAATTACAAACACACATAAAAACTCAAAGCCAGCAGATTTAAGATCAAATACATACACTGATTCTAGTGCATCATCTCCTGGTGCAAACACAGTTATCTCAGGATTGATTGTAGTTGATAATAGAAACAAGGAAAAAGTAGATTTGAGTTCATCTGGGTTAAAGGAAGACAAAAGATCGAACCATTTGCACCAAGATTTTGTTCTTTCCTCTCCAAAAGAAATTTCTGTTTGCATGACAAGAAACAGTACAAGTAGTTCCAGAACCTTGAAGTTGAGCCGAAGTAGAAGTTGTAAAGCAAGTATCATGAGGAATTTATCTTCAGATTGGTTTGAAGATGAAGACGTAATTCAGAACACACCTCCAGTAGGGAATGAAAAAGACTTCCCTGGAAGACCCGAGGGCTTTCCGAAGAACATTTATGCACTAAATTATAATACCAATGCAGCGAGACTTTCATTTAGTGGCCATGGGAATTCTGTGCAAAATTCTGCTGTTGATGATGTACAGAATGTGAAATCCTCCACTAACAAGGAAAGAGAGGGTAATGGTCCCTTGGCTCCAATAGGAAAGGAAACGGAAAATCTAAACAGGTTGAATTTACTGGCTGACCATGAGGTTCCGGGGACAGGATTGGATTCTATGATGTCTGAAACGAATGTCAAAGATATTGGCTTGGACCCAATGCAAGCTGATGACTCACAATGGCCTTCAAAATTCAAGAGGCTGCAAAGAGAGATCATTGAATTCTGGGATGCTTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTTCTTCTATTCAAAGGGGACCCATCAGATTCAATTTATATGGAGGTAGAGTTGAGAAGACTATCATACCTTAAGCAAACGTTTTCCCAAGGCAATCAGACTGTGGAAGATGGACGAACCCTCACACCTGAGTTAAGCATGAGATATCTTAGAAAAGAGAGGCAGATGTTGAGCAAGCAAATGCATAAGCGAGTGTCAAAATATGACAGACAGAATCTATACTTGAAATGGGGGCTTCGTTTGAGTTCAAAGCATAGGAGTTTGCAGTTGGCTCATCAACTGTGGAGTGACACAAAGGACACGGACCACGTTAGAGACAGTGCATCAATTGTTGCAAAGCTGGTTGGTTTAGTAGAGCCAGAACAGGCATTTAAGGAGATGTTTGGACTCAACTTTACCCCACAAACCACCAGTAGGAAATCTTTTAGTTGGACAGCCAGTGTGAGGCATATTTTGTGA 2883 0.4142 MGSVGGEEAIQEASGHDERILVSVRLRPLNEKELARNDVSDWECINDSTIIYRSNLSASDRSLYPTAYSFDSVFRTDSSTRQVYEKAAKEVALSVVGGINSSIFAYGQTSSGKTYTMSGITEYTVADIFHYIEKHTEREFMLKFSAIEIYNESVRDLLSPDCTPLRLLDDPERGTVVERLTEETIRDWNHFTELISFCEAQRQIGETALNEASSRSHQILRLTIESCAREFLGNDKSSSLSASVNFVDLAGSERASQTHSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFASCAKEVTTNAQVNVVVSDKALVKQLQKELARLEDELRNSVPSQLTSETAALLREKDRQIDMLKKEVRELTLQRDLAHSRISDMLQVHREDAATIELESMDPQYPNLHTRSSWNFENQREKPNVLSLDGEESVRSFDASQYSDGHSFSSDDNLFQLPDLEKNLLVRSSSPGLPVKRADAVSNNLDQKHVEDQHEKDNCKEVRCIELVDVITNTHKNSKPADLRSNTYTDSSASSPGANTVISGLIVVDNRNKEKVDLSSSGLKEDKRSNHLHQDFVLSSPKEISVCMTRNSTSSSRTLKLSRSRSCKASIMRNLSSDWFEDEDVIQNTPPVGNEKDFPGRPEGFPKNIYALNYNTNAARLSFSGHGNSVQNSAVDDVQNVKSSTNKEREGNGPLAPIGKETENLNRLNLLADHEVPGTGLDSMMSETNVKDIGLDPMQADDSQWPSKFKRLQREIIEFWDACNVSLVHRTYFFLLFKGDPSDSIYMEVELRRLSYLKQTFSQGNQTVEDGRTLTPELSMRYLRKERQMLSKQMHKRVSKYDRQNLYLKWGLRLSSKHRSLQLAHQLWSDTKDTDHVRDSASIVAKLVGLVEPEQAFKEMFGLNFTPQTTSRKSFSWTASVRHIL 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1232 960 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1232 960 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1232 960 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1232 960 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1232 960 PANTHER CENTROMERE PROTEIN E 2 960 - -
Aed11g1232 960 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1232 960 Pfam Domain of unknown function (DUF3490) 783 943 IPR021881 -
Aed11g1232 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 374 IPR027417 -
Aed11g1232 960 Coils Coil 389 416 - -
Aed11g1232 960 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1232 960 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 960 - -
Aed11g1232 960 CDD KISc_CENP_E 20 343 - -
Aed11g1232 960 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed11g1232 960 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1232 960 Gene3D Kinesin motor domain 10 374 IPR036961 -
Aed11g1232 960 MobiDBLite consensus disorder prediction 551 570 - -
Aed11g1232 960 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1232 Aed-Chr11 17513510 17521414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1232 2 377 Miscellaneous Gene Families AT2G21380 43.523 6.56e-84 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1232 K11498 - gmx:100809766 1725.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0076 9 531051 535774 Aed11g1232 11 17513510 17521414 ECH
Aed11g1232 11 17513510 17521414 Aed11g1232 11 17513510 17521414 ECH
Aed5g0343 5 2405481 2413777 Aed11g1232 11 17513510 17521414 ECH