Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0342 ATGGCGGTTGTGGACGAAGAAGCTGAATCTGTGAAAGGTTTTGATCCTCAAAAGAAGAAGCAGAAAAGAAACAAGTATGCTTTGGCGTGTGCTATTTTGGCTTCAATGACTTCCATCCTCCTAGGTTACGATATTGGAGTGATGAGTGGAGCAGCACTGTACATACAGAGAGATCTGAAAGTGTCGGACGTGCAAATCGAAATCCTGAACGGTATAGTAAACCTGTACTCTCCAGTTGGTTCTTTCATCGCCGGCAGAACCTCTGACTGGATAGGGCGGCGTTACACCATTGTCCTCGCCGGCGTCATCTTCTTCGCCGGAGCCATCCTCATGGGATTGTCCCCCAACTACGCCTTTCTCATGTTTGGCCGATTCTTCGCCGGAGTGGGAATCGGCTTCGCGTTCCTCATCGCCCCCGTCTACACCTCCGAAATCTCCCCCACCTCCTCTCGCGGCTTCCTCACTTCCTTGCCCGAGGTGTTTCTGAACGGAGGGATTTTAATCGGATACATATCAAACTACGGATTTTCTAAACTCACACTTCGGTTGGGTTGGCGGCTCATGCTTGGAGTCGGAGCCATTCCTTCTCTTTTCCTAGCCGTCGCAGTCTTAGCCATGCCGGAGTCGCCAAGGTGGCTCGTTGCCAAAGGTCGACTAGGCGAAGCCAAAAGAGTCCTCTACAAAATCTCCGACTCCGAAGAAGAGGCTCGGCTCAGGCTAGCCGACATTAAAGACACGGCTGGGATCCCTCAGGACTGCGACGACGACGTCGTTTTGGTAACGAAGCAAAGCCATGGGCACGGCGTGTGGAAAGAGCTTTTCCTTCACCCCACACTCGCGGTTAAACACATCTTCATCGCGTCCCTCGGCATTCACTTCTTCGCCCAGGCCACGGGCATAGACGCCGTCGTTTTATACAGCCCAAGAATCTTCGAGAAGGCCGGGATCAAATCCGATAAATACCTTCTTCTCGCGACGGTTGCTGTTGGGTTCGTGAAGACCGTTTTCATTTTGGTGGCCACTTTTTTGCTGGACCGAGCCGGGCGCCGCGTGTTGCTTTTATGCAGCGTTAGTGGGCTCATACTCTCGCTGTTGACTCTGGGCGTGAGTCTGAGTGTGGTGAACCATTCGCGGAGCACGCAGACGTGGGCCGTTGGGCTCAGCATCGCTGCGGTGCTGTCGTTCGCGGCCACTTTCTCGATCGGGTCGGGGCCCATCACGTGGGTCTATAGCTCCGAGATTTTCCCGCTGAGGTTGCGCGCTCAGGGTGTGGCTATAGGGGCTGTGGTGAATAGGGTCACCAGTGGGGTCATTACGATGACCTTTCTGTCCCTCTACAAGGCTATTACCATTGGGGGCGCTTTCTTTCTTTTTGCTGCTGTCGCTGTTGCCGCTTGGATTTTTCACTATACGCTTCTCCCCGAAACACGTGGGAAGACTCTTGAAGAAATTGAAAAGTCTTTTGGTCATTTCTGCAAGAAACCCAAAGCTGATCGACTTCACTCTAACGCCCAAATCCAATTAAGGACCCGTGCCCAAAATTAG 1545 0.5282 MAVVDEEAESVKGFDPQKKKQKRNKYALACAILASMTSILLGYDIGVMSGAALYIQRDLKVSDVQIEILNGIVNLYSPVGSFIAGRTSDWIGRRYTIVLAGVIFFAGAILMGLSPNYAFLMFGRFFAGVGIGFAFLIAPVYTSEISPTSSRGFLTSLPEVFLNGGILIGYISNYGFSKLTLRLGWRLMLGVGAIPSLFLAVAVLAMPESPRWLVAKGRLGEAKRVLYKISDSEEEARLRLADIKDTAGIPQDCDDDVVLVTKQSHGHGVWKELFLHPTLAVKHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDKYLLLATVAVGFVKTVFILVATFLLDRAGRRVLLLCSVSGLILSLLTLGVSLSVVNHSRSTQTWAVGLSIAAVLSFAATFSIGSGPITWVYSSEIFPLRLRAQGVAIGAVVNRVTSGVITMTFLSLYKAITIGGAFFLFAAVAVAAWIFHYTLLPETRGKTLEEIEKSFGHFCKKPKADRLHSNAQIQLRTRAQN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0342 514 TIGRFAM SP: MFS transporter, sugar porter (SP) family 6 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0342 514 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0342 514 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0342 514 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0342 514 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0342 514 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0342 514 ProSitePatterns Sugar transport proteins signature 2. 126 151 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed5g0342 514 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 477 IPR020846 GO:0022857
Aed5g0342 514 Pfam Sugar (and other) transporter 30 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed5g0342 514 ProSitePatterns Sugar transport proteins signature 1. 84 101 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed5g0342 514 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 14 501 - -
Aed5g0342 514 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 501 IPR045262 GO:0015144
Aed5g0342 514 SUPERFAMILY MFS general substrate transporter 12 486 IPR036259 -
Aed5g0342 514 Gene3D MFS general substrate transporter like domains 19 490 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0342 Aed-Chr5 2403087 2404903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0342 19 513 Organic Solute Cotransporters AT3G18830 65.408 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0342 - - gmx:100816478 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0342 5 2403087 2404903 Aed5g0342 5 2403087 2404903 ECH
Aed5g0342 5 2403087 2404903 Aed11g1108 11 16668684 16673426 ECH
Aed5g0342 5 2403087 2404903 Aed7g1311 7 10853023 10857803 ECH