Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1108 ATGATGGAGGTTGTGATTGTTGCAGTTGCTGCTACACTTGGGAATCTTCTGATGGGATGGGATAGTTCAACTATTGCAGCGGGTATGACCTACATCAAGAAGGAATTTGTCTTGGATGCCACACTTGAAGGGCTAATCGTGTCTATGTCGTTTATAACCGGAACTGTTGTGACAATATTCTCTGGGACAGTGTCTGATTTGTTTGGAAGACGCCCTATGCTGATAACATCTTCTATTATGTTCTTCCTCAGCGGGTTGGTAATGTTGTGGGCACCTAGTGTTGTTGTTGTTATCTTAGCAAGAATAATTGATGGGGTTGCCATTGCTCTTGCTGTTACCCTTACTCCTCTCTACATATCTGAGATTGCGCCGCCCGATATCAGAGGCCAATTAAACACTCTTACTCAGTTTGCTTGTTCTGGTGGAATGTTCTTGGCTTACATCATGGTGTTCTCAATGTCCTTGACGGATTCTCCAAGTTGGAGACTCATGCTTGGAGTTGTTTCTATTCCTGCTGTTGCTTATTTCTTACTGGCTGTGTTTTACCTGCCTGAGTCTCCTAGGTGGCTTGTGAGCAAAGGCCGGCTACTCGAGGCCGAAGGAGGTCTCAGCCCTGGGGGTGAAGCCACATCCATAGAAGAGTATGTGGTTGCCCCAGCTAGTGAGCTTCTTGTTAACCAGGAAGCAGGGAAAGATTATATAAAGTTGTATGGTCCCAATGATGAGGGAGTTACAATGGTTGCTCAACCGGTGAATGGACAGGGTAGCATGATATCCCGTAGCATGTTGTCTCAACAAGGAAGCTTTGGAAATTTGACTGGTGGTGGTCTTAAAGATCCTATTGTCACTCTCTTTGGAAGTTTGCATGAGAATACTCTCCCTGAGAGTGGAGGTTCACGCAGTATGCTACTTCATAATGCCAACAGTATCTTCAGCTTAGGAGAGCCAGCTAGTCCCTTTGGTACCAATGACAACCTGCACGCGCCACTGATGTCGTTTCAAGGAGAAAGAGATAGGGCTTATGGGTCCAAGGACATGTTAGATATGAGGAGCAATAGCAGCCTCAGAAGTCATAGTAGTTTGCTTCATGGGAATGCTGTGGACACTCCAAAAAACACAAACATTGGTGGAGGTTGGCAGTTGGTTTATAAATCAGTTGATGGCGCTGGTGGTGGGAAAAGAGAAGGACTTCAAAGGGTTTATTTGCACGCGGATACTACTGCAGTGTCTCAATCTCAACATGTTTCATTTGTTTCAACTTCTGGCTATGACATACCGATAGATGGCGGTGAAACGTATGCAGCTGCTGCTCTCGTCAGCCAGTCAGTTCTAGGTACTCATGATATGTTGCATCTGCCAGAAGTTTCTGCAAAAGGCCCAAAATGGAGAGCTCTGCTAGAGCCAGGAGTCAAGCGTGCATTGATTGTTGGAGTAGGACTTCAAATACTTCAACAGGCTGCTGGCATAAATGGGTTTCTCTTCTATGCTCCTCAGATTCTTGAGCAGGCAGGAGTAGGGGCTCTTTTATCAAATTTGGGCCTTACTTCAGCATCTGCTTCTTTTCTTGTTAATATCATTACAACATTCTGCATGCTTCCTTGTATAGCTCTTGCCATAAGACTCATGGATATTTCTGGCAGGAGGTCAATCATGCTGTACACAATCCCCATTTTGATAGTTTGTCTCCTGACACTAGTGATCAAGCAGTTCTTTGAAATCAATTCTTTCGTCGATGCAGCAATCACTGCTCTTAGTGTTGTGGTTTATGAAAGCGTCTTCTGCATGGGACTTGGTGTTATTCCCAACATCATATGTGCTGAAATCTTCCCAACAAGTGTTCGCGGAATCTGCATTTCTCTGACTTCTCTTACATATTGGGGTTGCACCTTGATTGTCACCTTGGTGTTCCCCTACTTGCTCCAGCTTCTAGGTCTCACTGGTGTCTTTGGATTATTTGTTGTTGGCTGCATCATTTCATGGATATTTGTCTACTTGAAAGTTCCTGAAACAAAAGGCATGCCTTTAGAAGTTATTATTGAATTCTTTGCTATTGGTGCAAAGCCTGGTACTGATCCTGCCTCAATTGGAATCAAAGGCTGA 2100 0.4448 MMEVVIVAVAATLGNLLMGWDSSTIAAGMTYIKKEFVLDATLEGLIVSMSFITGTVVTIFSGTVSDLFGRRPMLITSSIMFFLSGLVMLWAPSVVVVILARIIDGVAIALAVTLTPLYISEIAPPDIRGQLNTLTQFACSGGMFLAYIMVFSMSLTDSPSWRLMLGVVSIPAVAYFLLAVFYLPESPRWLVSKGRLLEAEGGLSPGGEATSIEEYVVAPASELLVNQEAGKDYIKLYGPNDEGVTMVAQPVNGQGSMISRSMLSQQGSFGNLTGGGLKDPIVTLFGSLHENTLPESGGSRSMLLHNANSIFSLGEPASPFGTNDNLHAPLMSFQGERDRAYGSKDMLDMRSNSSLRSHSSLLHGNAVDTPKNTNIGGGWQLVYKSVDGAGGGKREGLQRVYLHADTTAVSQSQHVSFVSTSGYDIPIDGGETYAAAALVSQSVLGTHDMLHLPEVSAKGPKWRALLEPGVKRALIVGVGLQILQQAAGINGFLFYAPQILEQAGVGALLSNLGLTSASASFLVNIITTFCMLPCIALAIRLMDISGRRSIMLYTIPILIVCLLTLVIKQFFEINSFVDAAITALSVVVYESVFCMGLGVIPNIICAEIFPTSVRGICISLTSLTYWGCTLIVTLVFPYLLQLLGLTGVFGLFVVGCIISWIFVYLKVPETKGMPLEVIIEFFAIGAKPGTDPASIGIKG 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1108 699 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed11g1108 699 Pfam Sugar (and other) transporter 7 222 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed11g1108 699 Pfam Sugar (and other) transporter 459 679 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed11g1108 699 PRINTS Sugar transporter signature 583 604 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1108 699 PRINTS Sugar transporter signature 606 618 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1108 699 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1108 699 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1108 699 PRINTS Sugar transporter signature 484 494 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1108 699 SUPERFAMILY MFS general substrate transporter 9 676 IPR036259 -
Aed11g1108 699 Gene3D MFS general substrate transporter like domains 441 684 IPR036259 -
Aed11g1108 699 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 671 IPR020846 GO:0022857
Aed11g1108 699 Gene3D MFS general substrate transporter like domains 1 242 IPR036259 -
Aed11g1108 699 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 316 695 - -
Aed11g1108 699 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 201 - -
Aed11g1108 699 PANTHER - 316 695 - -
Aed11g1108 699 PANTHER - 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1108 Aed-Chr11 16668684 16673426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1108 49 694 Organic Solute Cotransporters AT3G51490 50.072 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1108 - - gmx:100788445 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1108 11 16668684 16673426 Aed11g1108 11 16668684 16673426 ECH
Aed11g1108 11 16668684 16673426 Aed7g1311 7 10853023 10857803 ECH
Aed5g0342 5 2403087 2404903 Aed11g1108 11 16668684 16673426 ECH
Aed9g0002 9 11579 19430 Aed11g1108 11 16668684 16673426 ECH
Aed11g1108 11 16668684 16673426 Aed7g1311 7 10853023 10857803 PCT