Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0148 ATGATTTTCTATTATTACAGTTATGAGAGGTACTACAAGGATCTATTGGATCACATGATTAGAAATGATTTAGCACTTCGGGGGACTTTTGATGGTGTTGAACTTCTCATATTTGCATCTAATCAGCTTCCAGAAGATTCGCAACGTTGGAATATGTTATTTTTCCTATGGGGAATATTTAGAGGGAGGAGGATCAATCATTTAGATTCCTCAAAAAAGACATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAAGATTTTCCAACTGCTGTCATGACTTTGTCTGAAACCCGGTGTTCACCTAAGCGCATGGATGAAGAGTCCATTGACCAAGGTCACAATATGGTAAGTAGGAATTTTGATTGCGAAGAAACTATTTTTGACCAGACACATTTGGGTTTACAAGTAAACTTAGAGAGACAAGACAGTAGAATCAGCACCAAATCTACATCAGGGATTCCTATGACCAGTACACAATTGCGTCAAGATGTGAATTCCACTGGTTCGTCCCTGAGAGATAGTGTACCAGAGCATCGACAATACATAGAGTCTAAACCTCCTGAAGCAATGGGAACTAGTGTAAATAGTAGGATTGTGGAAACAAAAACTAATCATGATATTTCTGTTAAGCAAGAGAACTCTTTGCCTTTGGGGATCCCTTCTGTTGGTTGCCAAGAGATGGATACCGCAAGCAATATCAGTAAGGATAAAATTTTGGACAGAACAAACAATGATGAGAATCAGCAAAGGCTTAAAAGGAAACAGATGGAAGATGATCTTGATATTAACGTGGAGGCAACGTTTCAGGGAGACCTGGCTGTGAAAGCGGAAGAGGTCAACTGTCAGCTATCTAATGATAAAAAAGTCAAGCATATAGATCTTTCAGATACAGCTGTGGAGGCTTCTGCAGTTAGTTGTCAGAAAATGCCTTGGAATGAGGGAAATGGCAAATTTGAAGACGGAGAAAGTTATAGCAAGAAGCTGCAAACAGGTTTTGGTGGAATTCAGGGACGTTGTTATGATTCTGGAGCCAGGGAATCTTTTAGTGGTAGTTTTGCATCACTTGGAAATGATCTTGGTTCATGTTCTTCAGTGGAGGAGAAACGGTGCAAAGAACCTTGTGATGAGAAAATCATCCACGAGGACTTTGGAACGACGGAAAGAACCTTCTTTCCTGTTGTTGATAGTTGTAATAAAAATGAGTCGCTGATGGTGCTGAATGGGCCTCACATCGAGCACGGGGACCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGGTTTGGGGGGTGAAACAAAACCATCGTCACACTCACACACGGGTATGGGTATGGGTATGTTGCCTTTCTTTGTTGACAAGAGTCCAGATGAAATATTAACAAAAAAAGAGGGAGAGGATGAAAACGTTGCTGCATCTCTTTCCTTGTCTCTATCTTTTTCATCTTCAAACAAGGAACAACAGGTGAAAGCTGAGCAGGATGGGCATAAAGTGAATTCGCCGTTTCTCCTTTTTGGGAGATTCACGGACGGATAA 1536 0.4076 MIFYYYSYERYYKDLLDHMIRNDLALRGTFDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRINHLDSSKKTCIPSLNVMPNEKDFPTAVMTLSETRCSPKRMDEESIDQGHNMVSRNFDCEETIFDQTHLGLQVNLERQDSRISTKSTSGIPMTSTQLRQDVNSTGSSLRDSVPEHRQYIESKPPEAMGTSVNSRIVETKTNHDISVKQENSLPLGIPSVGCQEMDTASNISKDKILDRTNNDENQQRLKRKQMEDDLDINVEATFQGDLAVKAEEVNCQLSNDKKVKHIDLSDTAVEASAVSCQKMPWNEGNGKFEDGESYSKKLQTGFGGIQGRCYDSGARESFSGSFASLGNDLGSCSSVEEKRCKEPCDEKIIHEDFGTTERTFFPVVDSCNKNESLMVLNGPHIEHGDQFQVGIPNLELGLGGETKPSSHSHTGMGMGMLPFFVDKSPDEILTKKEGEDENVAASLSLSLSFSSSNKEQQVKAEQDGHKVNSPFLLFGRFTDG 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0148 511 Coils Coil 240 260 - -
Aed5g0148 511 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 263 501 - -
Aed5g0148 511 PANTHER - 7 262 - -
Aed5g0148 511 PANTHER - 263 501 - -
Aed5g0148 511 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0148 Aed-Chr5 1104081 1107229 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0148 - - gmx:100784908 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0148 5 1104081 1107229 Aed11g1866 11 21712895 21721940 ECH
Aed5g0148 5 1104081 1107229 Aed5g0148 5 1104081 1107229 ECH