Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1866 ATACGGGCAAAACGTGAGGCACAAACGCTCGCTAATGAGGTACTGACTACTGACCCACGCCACCTCAACGCGCACCCTTCCCACGCGCTTTTCTTGAACCAACACGCCTCACTAAACTCACACGTGCGGGGTGCTCACTTCATCCACCTTGACTTGTTTATCTTCGTGGCCCCAGATACTCTAAACTCTTGTAACCCACAATTTCCAAGACGCAGATTGATTTCTGCGACTTCAAACGACGTCGTACCGCCGGCCACTTCGCTCTTTCTTCTTTGTCATCGGAATTTGCCTAACGCAAGGAGTGGGAGTGGAGGTGCTGTCGTATTTGAACAGAATTCTGAATTTGAAAAAAAGATTGTCAAACAATCTATGATTCAGAACACTGATATGAGACTTGAATCGGGAACTTGCAATGTGTGCTCGGCTCCTTGTTCATCTTGCATGCATCTTAATCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCCAATGAAAACTGTCGTATAAGGGAGGCCAATTCTATGGATGAAGATAATGCATGTTCTCTTAGGAGCAGAGCTTGTGAAAGCTCACAGCACACTGTCAGTGAAGCAAGTAATATGCAGAGTGTTAATTCAGGTCATGATGCTCTGTCTGAAAATGCCGAGAGTAGACAGATCTTGCTGAATAAGTATCAGGATTCCAAGCATTTAGAAGGTCATGATGACAACACTTCTTGTATTAGTAGAGTTAGTGATGCCAATTTAGTGAATGGTAGCCATCAAGGGAATGAAGAGGGAATAATAATGCATGTGGAAAGGGATTCATGTTCTCATGTCCCAGAAAAGTTGTCAGAAGACTCAGTTGAGAATTCTAGTTCATCGTTGACCAAAGAGAGGGAACCTGTTGTTTCTGGCGAGAAATATATTGCTGTTAAGGAGGGTCTTATTGAGAGTACTTCCAAGATTTCACGAAAAGTATGTCCCAAGTCAGAAGCAGATACTGATGTCTGTGATGCTAAAAATGAAGATCCTATATGTGCAGTTCAAGATGGACAGTGTGAGAAAGCTGAAGAGCTGGTTAAATCGCCTGCCAAGCAGGAACCTCAATCTGAAGACGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCTGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAAGTCCCTGAAGGGGATTGGTTATGTGAAGAATGCAAAGATGCAGAGGAGAATGAAAATAGAAGACTGGATGTTGAAGACAAAAAAGTGGTTGAAGTTAGTTCAACCTCACAAGTTTCTGGCAAAAGATTTTCTGATAACATTGAAGTAGTGGTTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAGTACAGGATCACCAAAGACGTCAAGTCCCAAGAGATTGGTTCCACTGTCCCGAGAATCTTCATCTAAGAGCTTAGATAAATCAAAAGTGAAACCTGGTCATCTGATGCCTATTCGAAACCACTCTGGTGGTAATGACACAGAAATTGCCCGCTCTCCTTCCAGTGGTCCCCGGGGTCAAAATCCAAAAGGTATGTTGTTGAAGTCTAATTCATTCAACAACTTCAATTCCAAACCACGAGTCAAACTTGTTGATGAAGTTGTTCCCCCAAAACCAAAAGGGGGTAATGAACATACTTCAAAGAACTCGGAGATGCCTGCTTGGATAACTGGCAAATCAACATTATTCAAATCATCAAGTTTGGGGCGATCAAATGCAACTGAACCAAAAGTTAAAATGCTTTCGCCCAAGTCTGGAACTACTCAGGACCTGAAAGGATCTAGGCATTTAAAAGAATCTGGTGCCTTTGACAGGAAATTTCCGTCTAGTAGAATCGATCGGCCTCTGGCTAGTTCTGCTGTTTCCACTCCCAAGGGTGATCAAAAGCTTACACCTCGTGCTGAAAGCAGTAAACCTTCTGCAATAAACAACAATCGAGAGTTGAAGGTTAACCAGGATGGAAAATCAAGTGCATTATCAAGGTCAATGAGTAATATAAGCCGTAAAAGTTTGGAGCCTCAAGTTAGTTCAGAGAGAACATCAACCCATGTTGATGAAGCTCAGCAGGATGTGCTGCCTCGATCATGGGAGACAGCAAATCAGGTTGAGAAAAGCAGAGATAGTTCTAGTGATCGTGGAAGGCCAGCCGTTCCTACTTCTTCAAAAAACCCATTCTGTCAAAAATGTAAGGAATTCAGCCATGCTTTGGAATGTTGTACAGCTGGTACTACACAGGAATCTGGTGCTGAAATATCTGTCACTGCCTCAAGTAGTTCAAAAGAGGAGATGCATAAAGACAATATATTGAAAGCTGCAATCCAGGCTGCTTTACTTAGAAGGCCTGAAATATACAAGAAGAAAGAAGTATCTAATCAAACTGACGAGGTTTCTACCTCAGGCACAGAGTTGAATTGTGAAGTGACTTCAAAAGACCAAGTTTTGGTTTCCAGCACACTGAAGAATAGCATATCTGCTGATGAAACCCAAGAACAACGAGAAATCCTTGAGAATTCTACCTCAGATTCCTCCAAATCTTCATCTGACAATGATTTGAAGCAACTTAACTCTTTTCCAACTGACTTTCGGTCCCAACCAGGAAAGTCAGATTCCATTGGTCTTGCAGCTGGAAAGCCTGTAGTGGGAGACTTGTCTAATAAAGCTGTGACAATGTCAAGTGTTCCTTCAAAGACGTTGGCCTTTCCTGAATATGAATACACTTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATTCATATACTGGACTTCAGGCACATTTATCCTCTTGTGCTTCTCCTAACGTTCTTGGGGTAGTGAACAAGTTTCTACCCAAAGTTTCCCTCAATGAAGTTTCTCGCTTGAGCATGTGGCCTTCCCAATTTCATCATGGTGGTGTTAGTGATGATAATATTGCTCTTTACTTCTTTGCCAGGGATGTTGAAAGGCAAGCATATGGATATTATTCTTATATTGACTGCTGGAATATGTTGTTTTTCTTATGGGGTGTATTTAGGGGGAGGAGGATCAGTCATTCAGATTCTGCAAAAAGGATTTGTATTCCCAGTTTGAATGTAATGCCAGTTAAGGAGAAATCCTCAACTGCTGTTTTGACTATGCCTGAAACACATTGTTCGCCAAAGTGCAAGGATGAAGAATCAATTGATTGTGATAAAGCATGCAATGAACTTCTCCCATCCACTTCCATAGACCAACATCAGACTACTGCAAGTAGGAATGTTGATGTCAATGACCAGACACATTTGGGTTCAGAAGTAAACTTAGAGAAGCAAGATAGTAGGATCGACTCAAAATCTACATCAAGTGTTCCAACAAGCAGTGCTCTGTTATGTCAAGAAATGAACTCCTCTAGTTCATCCCTGAAAGCTAGTGTACTTCAACAAGAACAGTGCAGAGAGTCTAAACCTCCTGAAGCAATTGGAAAAAGTTCAAGTAGTAGGATTGTGGAAACAAAAACTGATTCTGATATTTCTGTCAAGCAAGAGAACACCAAGTCTTTGATTGTTTCTGAAAAAGGTGCTACAAGCAATATTGATAAAGATCAAATTTTGGAGAAAATGAACAGTGATGAAGACCAGGAGAGGCCTAGGAAGAAACAAAAAGAGGATTGTCCCTATATCGATTTGGAGGCAAATATTGAAAATCAAGAAACAGTTGCTGCAAGCAATTTTAGTAAGGATAAAAATTCAGTAACTCTTGTTGATAAAGATCAGCAAAGGCCCAAGAGGAAACAGAAAGATGATCATTATATTGACTTGGAGGCAAAACTTGAAGATCAAGAAACAGGTGCTGTAAGCAGCAATATATTTGAGGATAAAATTTCACCAAAAATGGACGTTGAGGAAGATTGGCAATGGCATAAGAAGAAACAGAAACATGATCACTATATTGACTTGGAGGCAACTTTTCACGGAGACCCAAGTGTAGAAGGGATCAACTGTGGACCACCTAATGATAAAGTTCAGCATATAGATCTTTCTGACACAATTATGCAGGGTTCTGCTGTCAGTTGTCAGAAAATGCCTTGGATTAAGGGAATTGTCAAATTAGAAGACAGAGAAAGTTCTGGCAAGAAGCTAAAGACAGGTTTTGGTGGGATTTATGGTTCTGGAGGTAGAGACTCTTTTAATGATAGTTTTACGTCTCTTGGAAATGATCTTGGCTCCTGTTCTTCAGTTGAGGACAAAGGATGTGAGGAAGCATGTGATGAGAAAATCATCCGTGAGGACTTGGGAACGATGGAAAGAACCTTCTTTCCAGTTGGCACACAGAATATTACCAACTCACTATCAGTGATGAATAGCATGTCAACCAAAGGGGTTGGTGGGTATGACGAAGGATTTCAAGATGGGATTCCCAATTTAGAGCTTGCCTTAGGGGGGAAAACAAAACCACCACCACCATCACCGGCTGTGCCTAAGGGTATGCTGCCTTTCTTAGTTGGGGCAGTAGACAGGCAAAATAACTGCCGCCCAGATAACTTGGGAGATGGGCAGGAGGATGATGGTGTTGCTGCATCTCTTTCCCTCTCTCTGTCCTTTCCATCTTCAAAAAAGGAACACACAAAAGCTGCGGAGCTTTTGCCTGATGGGCAGCGGCAGCGGGTGAACAACTCGTTTTTCCTTTTTGGGAGAAAATAA 4755 0.42 IRAKREAQTLANEVLTTDPRHLNAHPSHALFLNQHASLNSHVRGAHFIHLDLFIFVAPDTLNSCNPQFPRRRLISATSNDVVPPATSLFLLCHRNLPNARSGSGGAVVFEQNSEFEKKIVKQSMIQNTDMRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSNENCRIREANSMDEDNACSLRSRACESSQHTVSEASNMQSVNSGHDALSENAESRQILLNKYQDSKHLEGHDDNTSCISRVSDANLVNGSHQGNEEGIIMHVERDSCSHVPEKLSEDSVENSSSSLTKEREPVVSGEKYIAVKEGLIESTSKISRKVCPKSEADTDVCDAKNEDPICAVQDGQCEKAEELVKSPAKQEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEENENRRLDVEDKKVVEVSSTSQVSGKRFSDNIEVVVPAAKRQALESSTGSPKTSSPKRLVPLSRESSSKSLDKSKVKPGHLMPIRNHSGGNDTEIARSPSSGPRGQNPKGMLLKSNSFNNFNSKPRVKLVDEVVPPKPKGGNEHTSKNSEMPAWITGKSTLFKSSSLGRSNATEPKVKMLSPKSGTTQDLKGSRHLKESGAFDRKFPSSRIDRPLASSAVSTPKGDQKLTPRAESSKPSAINNNRELKVNQDGKSSALSRSMSNISRKSLEPQVSSERTSTHVDEAQQDVLPRSWETANQVEKSRDSSSDRGRPAVPTSSKNPFCQKCKEFSHALECCTAGTTQESGAEISVTASSSSKEEMHKDNILKAAIQAALLRRPEIYKKKEVSNQTDEVSTSGTELNCEVTSKDQVLVSSTLKNSISADETQEQREILENSTSDSSKSSSDNDLKQLNSFPTDFRSQPGKSDSIGLAAGKPVVGDLSNKAVTMSSVPSKTLAFPEYEYTWQGVFEVHRNGKPPDSYTGLQAHLSSCASPNVLGVVNKFLPKVSLNEVSRLSMWPSQFHHGGVSDDNIALYFFARDVERQAYGYYSYIDCWNMLFFLWGVFRGRRISHSDSAKRICIPSLNVMPVKEKSSTAVLTMPETHCSPKCKDEESIDCDKACNELLPSTSIDQHQTTASRNVDVNDQTHLGSEVNLEKQDSRIDSKSTSSVPTSSALLCQEMNSSSSSLKASVLQQEQCRESKPPEAIGKSSSSRIVETKTDSDISVKQENTKSLIVSEKGATSNIDKDQILEKMNSDEDQERPRKKQKEDCPYIDLEANIENQETVAASNFSKDKNSVTLVDKDQQRPKRKQKDDHYIDLEAKLEDQETGAVSSNIFEDKISPKMDVEEDWQWHKKKQKHDHYIDLEATFHGDPSVEGINCGPPNDKVQHIDLSDTIMQGSAVSCQKMPWIKGIVKLEDRESSGKKLKTGFGGIYGSGGRDSFNDSFTSLGNDLGSCSSVEDKGCEEACDEKIIREDLGTMERTFFPVGTQNITNSLSVMNSMSTKGVGGYDEGFQDGIPNLELALGGKTKPPPPSPAVPKGMLPFLVGAVDRQNNCRPDNLGDGQEDDGVAASLSLSLSFPSSKKEHTKAAELLPDGQRQRVNNSFFLFGRK 1584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1866 1584 MobiDBLite consensus disorder prediction 1160 1197 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 1216 1243 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 351 373 - -
Aed11g1866 1584 SUPERFAMILY FYVE/PHD zinc finger 367 429 IPR011011 -
Aed11g1866 1584 SMART PHD_3 380 427 IPR001965 -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 851 901 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 864 895 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 192 212 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 521 554 - -
Aed11g1866 1584 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1025 1575 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 472 753 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 1126 1145 - -
Aed11g1866 1584 ProSiteProfiles Zinc finger PHD-type profile. 378 429 IPR019787 -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 644 728 - -
Aed11g1866 1584 PANTHER - 1025 1575 - -
Aed11g1866 1584 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 130 1020 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 620 640 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 575 602 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 473 497 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 1221 1243 - -
Aed11g1866 1584 MobiDBLite consensus disorder prediction 272 293 - -
Aed11g1866 1584 PANTHER - 130 1020 - -
Aed11g1866 1584 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 363 453 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1866 Aed-Chr11 21712895 21721940 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1866 - - gmx:100806639 2413.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0148 5 1104081 1107229 Aed11g1866 11 21712895 21721940 ECH
Aed11g1866 11 21712895 21721940 Aed11g1866 11 21712895 21721940 ECH