Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2502 ATGGAACTGGAACTGAAACTTCTAACGGTTTTATTGATGATAGTGTCACTGTCTGCAACTGCTGCAGCTGATTACGTTCGACCGCAGCCTCGCAAAACCTTCCATCTCCCATGGCATTATAAACCTTCCTCTTACCCTCAGCAGGTACACATTTCTTTAGCAGGAGACCAGCACATGAGAGTTACCTGGATTACTGATGATAAGTCCGCTCCTTCAGTTGTAGAATACGGAACATTGCCCGGGCGATATGACTCTGTAGCTGAAGGAGAGACCACCTCTTACAGTTATCTAGTATACAGCTCAGGAAAGATACACCATACTGTAATTGGGCCTTTAGAGCATAATTCTGTGTACTATTACCGATGTGGTGCACAAGGCCCCGAGTTCCAGCTCAGAACTCCACCAGCTCAACTTCCTATCACTTTTGCTGTGGCTGGTGATTTAGGTCAAACCGAATGGACTAAATCAACATTGGATCACATTGACCAATGTAGATATAATGTTCACCTGCTTCCAGGAGACCTTTCATATGCTGATTATATCCAGCACCGCTGGGACTCGTTTGGTAGGCTAGTGCAGCCACTTGCCAGTGCAAGGCCATGGATGGTAACACAAGGGAACCATGAAGTGGAGAGTATACCTTTGTTGAAGGATGGGTTTCTGTCCTATAATGCCAGATGGAAAATGCCATTTGAGGAGAGCAGATCAAATTCAAATCTCTATTATTCATTTGAAGTTGCAGGTGTTCACATTATAATGCTCGGGTCCTATGCTGATTATGATGAGTACTCTGAACAATATGGATGGCTAAAGGAAGATCTGTCAAAGGTTGATAGGAAAAGGACACCTTGGTTGCTTGTGTTATTTCATGTGCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGGGCTGATATGATGGCAGCCATGGAGCCATTGCTTTATGCTGCTAGCGTCGATTTAGTTCTTGCTGGTCATGTGCATGCTTATGAACGCTCAAAACGTGTATACAATGGAAGACTAGATCCTTGTGGTTCAGTCCATATAACAATTGGTGATGGAGGAAACAATGAAGGCTTAGCTCATAGGTATATAAATCCACAGCCAATTTGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTAAAGATTGTAAACACTACGCACGCTTTCTGGAGTTGGCACAGGAATGACGATGATGAGCCAGTAAAATCAGATGATATCTGGATAACCTCTTTGACCAGCTCAGGGTGCATTGATCAGAAGAGAAATGAACTCAGGAATAAACTTTTGACACCTTAA 1311 0.4355 MELELKLLTVLLMIVSLSATAAADYVRPQPRKTFHLPWHYKPSSYPQQVHISLAGDQHMRVTWITDDKSAPSVVEYGTLPGRYDSVAEGETTSYSYLVYSSGKIHHTVIGPLEHNSVYYYRCGAQGPEFQLRTPPAQLPITFAVAGDLGQTEWTKSTLDHIDQCRYNVHLLPGDLSYADYIQHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNARWKMPFEESRSNSNLYYSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRKRTPWLLVLFHVPWYNSNTAHQGEGADMMAAMEPLLYAASVDLVLAGHVHAYERSKRVYNGRLDPCGSVHITIGDGGNNEGLAHRYINPQPIWSEFREASFGHGELKIVNTTHAFWSWHRNDDDEPVKSDDIWITSLTSSGCIDQKRNELRNKLLTP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2502 436 PANTHER ACID PHOSPHATASE RELATED 7 427 IPR039331 GO:0003993
Aed4g2502 436 SUPERFAMILY Metallo-dependent phosphatases 139 406 IPR029052 -
Aed4g2502 436 Pfam Purple acid Phosphatase, N-terminal domain 46 127 IPR015914 GO:0003993|GO:0046872
Aed4g2502 436 SUPERFAMILY Purple acid phosphatase, N-terminal domain 34 135 IPR008963 GO:0003993|GO:0046872
Aed4g2502 436 Gene3D - 45 136 - -
Aed4g2502 436 Gene3D - 137 423 IPR029052 -
Aed4g2502 436 CDD MPP_PAPs 139 415 IPR041792 -
Aed4g2502 436 Pfam Iron/zinc purple acid phosphatase-like protein C 348 403 IPR025733 -
Aed4g2502 436 Pfam Calcineurin-like phosphoesterase 141 331 IPR004843 GO:0016787
Aed4g2502 436 PANTHER PURPLE ACID PHOSPHATASE 18 7 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2502 Aed-Chr4 27078126 27082026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2502 46 427 Miscellaneous Gene Families AT2G03450 25.054 5.72e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2502 K22390 - gmx:100782338 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2502 4 27078126 27082026 Aed4g2502 4 27078126 27082026 ECH
Aed4g2502 4 27078126 27082026 Aed3g2488 3 27378991 27383686 PCT