Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2488 ATGACAGAAAGAAATATTGGAGTGGAAGGAAGTACATTATTGTCTCAGGTTGTTATTATGGAACTCAAACAACTCCTTCTGATTCTGATTCTAACGCTTCTTTTTGCAACTGCCACGCCTGAATATGTTCGACCTCTTCCTCGTAAAACCTTAACCATCCCTTGGGATTCAATTTCCAAAGCTCACTCCTCTTACCCTCAACAGGTGCACATTTCTTTGGCAGGAGACAAGCACCTGAGAGTTACATGGATAACCGATGATAAACATTCGCCTTCATATGTAGAATACGGAACATTGCCTGGGAGATATGACTCAATAGCTGAAGGAGGGTGCACCTCTTATAACTATCTGTTATACAGCTCAGGAAAGATACACCATGTTGTAATAGGACCTTTGGAAGACAATACTGTGTACTTTTATCGGTGTGGTGGAAAAGGTCCTGAGTTTCAGCTCAAAACTCCTCCAGCTCAATTTCCAATTGCTTTTGCTGTGGCTGGGGATCTGGGTCAAACTGGTTGGACTAAATCAACACTGGCTCACATTGACCAATGCAAATATGATGTCTACCTGCTTCCAGGAGACCTTTCATATGCTGATTGTATGCAGCATCTGTGGGACGATTTTGGGAAACTAGTGGAGCCGCTTGCGAGTACAAGACCATGGATGGTAACAGAAGGAAACCATGAAGAGGAGAACATACCATTGCTAGTGGATGAGTTTGTTTCCTATAATTCCAGATGGAAAATGCCGTTTGAGGAAAGTGGATCAACTTCAAATCTCTATTATTCTTTTGAAGTTGCAGGTGTTCATGTTATCATGCTTGGCTCCTATGCAGATTATGATGTGTACTCTGAACAATATAGATGGCTCAAGGAAGACCTGTCAAAGGTGGATAGGAAAAGGACACCTTGGCTGCTTGTGCTATTTCATGTGCCATGGTATAATAGTAACAAGGCTCATCAAGGTGCAGGGGATGATATGATGGCTGCTATGGAGCCATTGCTCTATGCTGCTAATGTTGATTTAGTTATCACTGGTCATGTTCACGCTTATGAACGTTCAAAACGTGTTTATAATGGAAGATTGGATCCCTGTGGTGCCATCCATATAACTATTGGTGATGGAGGAAACAGAGAAGGCTTAGCTCATAAGTATATAAACCCACAGCCAAAGTGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTGAAGATTGTAAACTCCACTCATGCCTTCTGGAGTTGGCACAGGAATGACGATGATGAGTCAGTAAGAGCTGATGATATCTGGATAACCTCTTTGGTCAGCTTAGGATGTGTTGATCAGAAGATACATGGACTCAGAAGTACACTTATGATACTATAA 1371 0.4223 MTERNIGVEGSTLLSQVVIMELKQLLLILILTLLFATATPEYVRPLPRKTLTIPWDSISKAHSSYPQQVHISLAGDKHLRVTWITDDKHSPSYVEYGTLPGRYDSIAEGGCTSYNYLLYSSGKIHHVVIGPLEDNTVYFYRCGGKGPEFQLKTPPAQFPIAFAVAGDLGQTGWTKSTLAHIDQCKYDVYLLPGDLSYADCMQHLWDDFGKLVEPLASTRPWMVTEGNHEEENIPLLVDEFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIMLGSYADYDVYSEQYRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNKAHQGAGDDMMAAMEPLLYAANVDLVITGHVHAYERSKRVYNGRLDPCGAIHITIGDGGNREGLAHKYINPQPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDESVRADDIWITSLVSLGCVDQKIHGLRSTLMIL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2488 456 Gene3D - 157 438 IPR029052 -
Aed3g2488 456 Gene3D - 65 156 - -
Aed3g2488 456 PANTHER PURPLE ACID PHOSPHATASE 22 447 - -
Aed3g2488 456 CDD MPP_PAPs 157 435 IPR041792 -
Aed3g2488 456 PANTHER ACID PHOSPHATASE RELATED 22 447 IPR039331 GO:0003993
Aed3g2488 456 Pfam Calcineurin-like phosphoesterase 162 351 IPR004843 GO:0016787
Aed3g2488 456 Pfam Purple acid Phosphatase, N-terminal domain 66 146 IPR015914 GO:0003993|GO:0046872
Aed3g2488 456 SUPERFAMILY Metallo-dependent phosphatases 160 424 IPR029052 -
Aed3g2488 456 SUPERFAMILY Purple acid phosphatase, N-terminal domain 61 155 IPR008963 GO:0003993|GO:0046872
Aed3g2488 456 Pfam Iron/zinc purple acid phosphatase-like protein C 367 426 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2488 Aed-Chr3 27378991 27383686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2488 66 424 Miscellaneous Gene Families AT2G03450 27.189 1.30e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2488 K22390 - gmx:100787977 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2488 3 27378991 27383686 Aed3g2488 3 27378991 27383686 ECH
Aed4g2502 4 27078126 27082026 Aed3g2488 3 27378991 27383686 PCT