Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2470 ATGGAGGCTCACGGGAGTTCCTTCGTGTCCAAGGCGCGAACCGCGTTCCATTCCGCAGCTGCGAAAGCGGAGCGCGTTCTCTTGGACTTCAAAATCGATCTAGATTCTGATAAGCAACTTCACGACGAGTTTGGGAGGAAGCGAGGCGATGAATCTGGTCCGAGTGAGAATGAGTCAAAGTTTCTTAATGAGCTGAAGTATATAAAGTGGAGACCTCCACATATAGGAACAAAGCAGGACTGGCAAGATAGAATAAACAACATGCGAAAAGGCAGAAAGGAAGTTGAAGTAACGGATAAAGTTGGGGATGTAAACATGGGATCTGTTCCATTTTATGATGAAAATTTGTACATCCTCAATGTGAAAAATGATCTTGATGCCAAGGCTTCAGAAGCAATTCCCTCAGTTGACGTCTTAACTGCTGCGACCAAACACCTCATCCCGCCATCAGCTGTCCTGAAGCAGTTGGCTATAGCTATTGAGGCTGGAAGGCAGACAAACTCATTGAAAGATTTTGTAGCTTCATCAAGGGGTTCATCACCTGCCAGAGATAAGGCAAGCTTAAGTCTCACTTCAGTGAAGGCTTTAGTGTTGCGTGAAAAGGAGGACAAACTAACTTCTGAGTTTAGTAGCGATGAAAAAGTTGTGTATTTGATTAATTCATTGTTTGATCAAGAGGGAGAGTTCCTTAGAAGGAAGATCAACTCTGATCCAGAGGAAACTTCCATATCATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTAGTTGTTAAGCTAGCTGAAGTAATTGGAAACTTCAAGACGCTTCGAGAAATGTCTCTTTTTTGGTCCAGGGTTGTTGATGAACTGAGAAAGCATTGGTCCGAAGAAAAACATTTACCAGGAGTCCCCTCAGATGACATTCCAGATCTAAAGTCATGCCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCGCCATATTATTGCCACTGAATCTCTGGACTCTATGGTGATGGAAGCCAATTCAAATACATTAGAGTCAGCAAACTACACGGGCAAAATTCCTACAAGCCCTTTATTATATGCAAGATTAAGAACTGGAGAGCTTGTTCTTCGACTTGGTGCTGATTGCCCATCTGAAGATCTGACATTACTGGAGACTGGCGAGCCTGCATACTCTCCTGTCACCCAGGAGGGACCATTGCTTACAGAAGATCTGATCAAAGAGACAGAGGAGTTTGTGCTGCAGACAGGGAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTACTCTCCTCCTGATTGGACTGAAAGTGAGGGAAGTACTGAGGATAGAGATTCCTTTTATGGTGGTCAGTCAATGTCTACCAGAGGTCAACTAAGTTTGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAGTTCCAGCTGTTAAACAGACACCTCTCTATGATGAGGATTTGGCAGTGGAGGGGATTCTAGATGCATTTGTGGACATCCAGCCTTCAGAGCTTTACAGACAGCTGTTTGTTTCTCTTCTCGGTTTAGGATTAGCAATTGCTGAAACTATGCTGTTTGGTGACATTGACATCTCAAAGTTGTTCAATGACTGCAAGGAGTACATAGTTACCACTTGTCAAAGCGACAGATTCAATGAGAAAATCAATGAACTTGTTCAGATGTATGAAACGGTGGAGACAATGTTGCTGAATCCAGATGAGGCACTGAAGATGAAGAAAATGGAAGAATCAACTATGACTACTGATGAACCAAAGCGCCGGATTTCTACTGGTGAGCCAAAGCACCGGTTTAAGAAACTTAGCCATATCTTTGCTGGCAAAGATAAACTGTTGACAAGGCCTGTCTGGAAAGATGAGGTAAACGATGAAGAAAAGCAAATTCGACATTCTTTCTCGAGTTTCTTTGACAGCAAATCATCTTTATTTTCAAAGAAGCCTCCTAAGCCTGGAAGCCTATACCCTACTGAGCAAGCTCTCTCTCTGGAAAGTGATTGGACAATTATTTAG 2115 0.4293 MEAHGSSFVSKARTAFHSAAAKAERVLLDFKIDLDSDKQLHDEFGRKRGDESGPSENESKFLNELKYIKWRPPHIGTKQDWQDRINNMRKGRKEVEVTDKVGDVNMGSVPFYDENLYILNVKNDLDAKASEAIPSVDVLTAATKHLIPPSAVLKQLAIAIEAGRQTNSLKDFVASSRGSSPARDKASLSLTSVKALVLREKEDKLTSEFSSDEKVVYLINSLFDQEGEFLRRKINSDPEETSISSLPRDIHGAPPESLVVKLAEVIGNFKTLREMSLFWSRVVDELRKHWSEEKHLPGVPSDDIPDLKSCLLYQQFQVINCCISRKRRHIIATESLDSMVMEANSNTLESANYTGKIPTSPLLYARLRTGELVLRLGADCPSEDLTLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLQTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTESEGSTEDRDSFYGGQSMSTRGQLSLRMQKEGNLWRELWETSKPVPAVKQTPLYDEDLAVEGILDAFVDIQPSELYRQLFVSLLGLGLAIAETMLFGDIDISKLFNDCKEYIVTTCQSDRFNEKINELVQMYETVETMLLNPDEALKMKKMEESTMTTDEPKRRISTGEPKHRFKKLSHIFAGKDKLLTRPVWKDEVNDEEKQIRHSFSSFFDSKSSLFSKKPPKPGSLYPTEQALSLESDWTII 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2470 704 Pfam Rab3 GTPase-activating protein catalytic subunit 375 525 IPR026147 -
Aed4g2470 704 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 704 - -
Aed4g2470 704 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 704 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2470 Aed-Chr4 26828672 26835765 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2470 K18270 - gmx:100800515 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2470 4 26828672 26835765 Aed4g2470 4 26828672 26835765 ECH
Aed4g2470 4 26828672 26835765 Aed3g2517 3 27543359 27552654 PCT