Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2443 ATGGCGGTGACAGATTCTCAAAATCCTCTTGATGGAAACACCTGTGGTTCCTTGTTACAAAAGCTGCAGGAAATATGGGATGAGGTTGGTGAGAGTGATGAGGAGCGAGACAAGATGCTCCTCCGGATAGATCAAGAGTGTTTGGATGTGTACAAAAGAAAGGTTGAGCAGGCTTCTAAATCAAGGGCACAGCTACTTCAATCCTTGTCTGATGCTAAGCTTGAGCTTTCTAGTCTTTTATTGGCTCTTGGTGAAAACAGCTTCATGGGAATGCCTGACAAGACTTCAGGCACTATTAAGGAACAGCTTGCAGCCATAGCACCAACACTGGAACAGTTATGGCAACAAAAAGAGGAAAGAATAAAGGAATTTTCAGATGTACAGTTACAGATTCAAAAAATTTGTGGAGAGATAACTGGGGACCTGAACCCTGATCAGACTGGATCAGGAACATTTGCAGTTGATGAGTCTGACTTGTCCATGAAGAAGTTGGATGAATATCAATCCCAACTCCATGAACTTCAAAGGGAAAAGAGTGAGAGGTTGCACAAGGTTCTTGATTATGTGAGTACTGTGCATGATCTTTGTGCTGTCCATGGCATGGACTTCTTCAGTATTGTGACTGAAGTTCATCCAAGCTTAAATGAATCTATCGGTGTTCATTCCAAAAGCATAAGCAATGGCACACTAGCTAAACTGGCTAAGACAGTCTCAACACTGAAAGAAGATAAAAAGCAGAGGCTACACAAGCTTCAAGAATTGGCCTCTCAGTTAATTGATCTGTGGAATCTAATGGATACTCCTATAGAGGAAAGGAGACTATTTGATCATGTTACATGTAATATCTCAGCTTCAGTAGATGAAGTCACTGTTCCCGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAAATTGCTTTCAAGAAGCAAGACGAGCTTGAAGAGATATATGCCTGTGCTCATGTAGAAATAAACCCTGAAGCTGCTCGAGGGAATATTTTGTCACTGATTGACTCTGGAAACATTGAACCATCCGAATTACTGGCTGACATGGACAAACAGATAGCTTCAGCGAAAGAAGAAGCTTTAAGCCGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAACCGGGATGAAAACAGGTATAATTCAAGTAGAGGTGCACACTTAAACCTCAAACGTGCAGAGAAAGCTCGGATTCTGATCAGCAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGTGCTTGGGAAGAAGCACATGACATGTCATTCACATATGATGGTGTTCCTCTTCTTGCTATGTTGGATGAATATGCCATGCTCAGGCATGAACGGGAAGAGGAAAAACGAAGAATGAGGGACCAGAAAAAGTATAATGAGCAGCAAAACACAGATCAGGAATCTGTGTTAGGTTCAAGACCAAGTCCTGCAAGGTCACTTGGCAACAAGAAGATAGTTGGTCCTCGTCCCAATGGAGGTGCAAATGGTACTCCTAGGCGGCTATCTCTTAATGCTCCTCATAATGGAAGCAGGTCCTCAACAAAAGATGGAAAAAGGGATAATACTAGACCAGTTGCTCCCCTAAACTATGTATCAATATCAAAAGATGATGCTGCTTCCCATGTTTCTGGTACTGAACCAGTCCCAACATCACCCTAG 1755 0.4251 MAVTDSQNPLDGNTCGSLLQKLQEIWDEVGESDEERDKMLLRIDQECLDVYKRKVEQASKSRAQLLQSLSDAKLELSSLLLALGENSFMGMPDKTSGTIKEQLAAIAPTLEQLWQQKEERIKEFSDVQLQIQKICGEITGDLNPDQTGSGTFAVDESDLSMKKLDEYQSQLHELQREKSERLHKVLDYVSTVHDLCAVHGMDFFSIVTEVHPSLNESIGVHSKSISNGTLAKLAKTVSTLKEDKKQRLHKLQELASQLIDLWNLMDTPIEERRLFDHVTCNISASVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQDELEEIYACAHVEINPEAARGNILSLIDSGNIEPSELLADMDKQIASAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYNSSRGAHLNLKRAEKARILISKIPALVDTLVAKTRAWEEAHDMSFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKYNEQQNTDQESVLGSRPSPARSLGNKKIVGPRPNGGANGTPRRLSLNAPHNGSRSSTKDGKRDNTRPVAPLNYVSISKDDAASHVSGTEPVPTSP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2443 584 Coils Coil 463 483 - -
Aed4g2443 584 Coils Coil 157 184 - -
Aed4g2443 584 Coils Coil 48 75 - -
Aed4g2443 584 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 584 IPR007145 GO:0000226|GO:0008017
Aed4g2443 584 MobiDBLite consensus disorder prediction 568 584 - -
Aed4g2443 584 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 509 - -
Aed4g2443 584 MobiDBLite consensus disorder prediction 529 543 - -
Aed4g2443 584 MobiDBLite consensus disorder prediction 478 584 - -
Aed4g2443 584 MobiDBLite consensus disorder prediction 478 493 - -
Aed4g2443 584 Gene3D - 371 504 - -
Aed4g2443 584 Coils Coil 241 261 - -
Aed4g2443 584 PANTHER MICROTUBULE-ASSOCIATED PROTEIN, MAP65/ASE1/PRC1-RELATED 5 584 - -
Aed4g2443 584 Coils Coil 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2443 Aed-Chr4 26611699 26616706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2443 13 541 EF-hand Containing Proteins AT5G62250 41.604 1.41e-123 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2443 K16732 - qsu:112012954 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2443 4 26611699 26616706 Aed4g2443 4 26611699 26616706 ECH
Aed4g2443 4 26611699 26616706 Aed3g2544 3 27692546 27697034 PCT