Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2544 ATGGCAGTGACCGAAGTTCAAAATCCTCTTCTTGGAGAAAACACATGTGGTTCCTTGTTAAAAAAGCTCCAGGAAATATGGGATGAAGTTGGTGAGAGCGACGACCAACGAGACAAGATGCTTCTTCAGTTAGAGCAGGAGTGCTTGGATGTGTACAAGAGAAAGGTTGAGCAGGCTGCCAAGTCAAGGGCGCAGCTACTTCAAGCTCTGTCTGATGCTAAGCTTGAGCTTTCCACTCTTCTTTCAGCACTTGGAGAAAAGAGCTTTGCTGGAATTCCTGAGAACACTTCTGGAACTATCAAAGAACAGCTTGCAGCTATAGCACCAGTACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATTAAGGATTTCTCAGATGTACAGTCACAGATCCAACAAATATGTGGAGAGATTGCTGGGAACTTGAACCTTAATGATGTTTCACTTGCAGTTGATGAGTCTGACCTGTCCCTCAAGAAGTTAGATGAATATCAATCTGAGCTCCAAGAACTTCAGAAGGAAAAGAGCGAGAGGTTGCATAAGGTTCTTGAGTTTGTGAGCACTGTGCATGATCTATGTGCTGTCCTTGGTATGGACTTCTTCAGTACTGTTACTGAGGTTCATCCAAGTCTAAATGACTCGACTGGTCTCCAAGAATTGGCTTCTCAGTTGATTGATCTTTGGAATCTAATGGATACTCATTCAGAGGAAAGGAGACTATTTGACCATGTTACCTGTAATATGTCAGCTTCTGTTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAGGAAATTGCTTTTAAGAAGCAAGCAGAACTCGATGAGATATTTGCCCGTGCTCATGTAGAAGTAGATCCAGATGCTTCCCGGGAGAAGATAATGGCATTGATTGATTCAGGAAACATTGAACCATCTGAATTACTGGCTGACATGGACAATCAGATAGCAAAAGCAAAAGAAGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAGAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAACGTGCCGAGAAAGCTCGGATATTGGTCAACAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGTGCATGGGAAGAAGAACATGGCATGTCATTTACGTATGATGGTGTTCCTCTTCTTGCAATGTTAGATGAATATGCCATGCTCAGACATGAAAGGGAAGAGGAAAAACGGAGGATGAGGGATCAGAAAAAGCATCACGAGCAGCGAAACACAGAACAAGAAGCCATCTTTGGTTCAAGACCCAGCCCTGCTAGGCCAGTTAGTTCCAGTAAGACAGGAGGTCCTCGGGGTAATGGAGGAGCCAATGGTACTCCTAACCGACGGCTATCGCTTAATGCTCATCAAAATGGAAACAGGTCCACATCAAAAGATGGAAAAAGGGATAACAGACTATCTGCTCCGGTGAATTATGTGGCCATATCAAAGGAAGATGCTGCATCCCATGTTTCTGGTACTGAACCCATCCCGGCATCACCCTAA 1656 0.4378 MAVTEVQNPLLGENTCGSLLKKLQEIWDEVGESDDQRDKMLLQLEQECLDVYKRKVEQAAKSRAQLLQALSDAKLELSTLLSALGEKSFAGIPENTSGTIKEQLAAIAPVLEQLWQQKEERIKDFSDVQSQIQQICGEIAGNLNLNDVSLAVDESDLSLKKLDEYQSELQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGLQELASQLIDLWNLMDTHSEERRLFDHVTCNMSASVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQAELDEIFARAHVEVDPDASREKIMALIDSGNIEPSELLADMDNQIAKAKEEALSRKDILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEEHGMSFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKHHEQRNTEQEAIFGSRPSPARPVSSSKTGGPRGNGGANGTPNRRLSLNAHQNGNRSTSKDGKRDNRLSAPVNYVAISKEDAASHVSGTEPIPASP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2544 551 Coils Coil 155 182 - -
Aed3g2544 551 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 218 551 IPR007145 GO:0000226|GO:0008017
Aed3g2544 551 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 219 IPR007145 GO:0000226|GO:0008017
Aed3g2544 551 MobiDBLite consensus disorder prediction 475 511 - -
Aed3g2544 551 MobiDBLite consensus disorder prediction 445 465 - -
Aed3g2544 551 MobiDBLite consensus disorder prediction 445 528 - -
Aed3g2544 551 Gene3D - 337 471 - -
Aed3g2544 551 Coils Coil 267 287 - -
Aed3g2544 551 Coils Coil 430 461 - -
Aed3g2544 551 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 199 - -
Aed3g2544 551 Pfam Microtubule associated protein (MAP65/ASE1 family) 218 476 - -
Aed3g2544 551 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 218 551 - -
Aed3g2544 551 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 5 219 - -
Aed3g2544 551 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2544 Aed-Chr3 27692546 27697034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2544 13 509 EF-hand Containing Proteins AT5G62250 39.266 1.37e-110 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2544 K16732 - gmx:100806071 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2544 3 27692546 27697034 Aed3g2544 3 27692546 27697034 ECH
Aed4g2443 4 26611699 26616706 Aed3g2544 3 27692546 27697034 PCT