Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2442 ATGGGAGACAATGTTGTAGTGTCCAATATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAGGAAAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCGAAGTCCATGCATCACCTTCTGAAAGAAGCCCTAGATGGAATTAAACTTGAAGCCCCTTATAAGATACCATTTGTGGTTGTGGATTTGGGGTGTTCATGTGGCAGCAACACGATCAATGTGGTGGATGTGATCATCAAGCACATCATCAAGCGCTATGAGGCCTTGGGATTAGACCCACCCGAGTTCTCAGCTTTCTTCTCTGACCTTCCTAGCAATGATTTCAACACCCTCTTTCAGCTCCTTCCTCCCTTCGCCAACTATGGGGTTAGCATGGAAGAGTGCCTTGCCGCCAACAACCACCGCTCCTACTTCGCCGCCGGTGTCCCCGGCTCCTTCTACCGGAGACTTTTTCCGGCCAGCTTCATTGATGTTTTCCACTCCGCCTTTTCCTTGCATTGGTTATCTCAGGTACCAGAATCTGTTTTGGACAAGAGGTCAAGTGCATACAACAAGGGCAGGGTGTTTATCCATGGTGCCAGTGAGATAACTGCAAATGCTTACAAAAAACAATTCCAAGCAGACTTAGCAAGATTCTTGAGCTCAAGGGCAGTGGAATTGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCTTAGGAAGAACTTCTGTGGACCCCACAGACCAAGGTGGGGCCGGCCTCCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCAGTGAGAAAAGAGACAGTTTCAACATTCCAGTTTATGCACCAAGCCTGCAGGACTTCAAGGAGGTGGTTGAAGCCGGTGGTTCATTTGCCATAAACAAGCTTGAGGTTTTCAAAGGTGGAAGTCCTCTTGTGGTGAACCAGCCAGATGATGATAGTGAAGTTGGAAGAGCCCTTGCCAACAGCTGCAGGAGTGTGTCTGGTGTCCTTGTTGATGCTCACATTGGTGACAAGCTCAGTGAGGAACTGTTTCTGAGAGTTGAACGTAGAGCCACAAGCCATGGCAAAGACTTATTAGAGCAACTACAGTTCTTTCACATTGTTGCATCCCTTTCTTTTGCTCTATGA 1155 0.4797 MGDNVVVSNMELERLLSMKGGKGEESYANNSQAQAIHAKSMHHLLKEALDGIKLEAPYKIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYEALGLDPPEFSAFFSDLPSNDFNTLFQLLPPFANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPASFIDVFHSAFSLHWLSQVPESVLDKRSSAYNKGRVFIHGASEITANAYKKQFQADLARFLSSRAVELKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISSEKRDSFNIPVYAPSLQDFKEVVEAGGSFAINKLEVFKGGSPLVVNQPDDDSEVGRALANSCRSVSGVLVDAHIGDKLSEELFLRVERRATSHGKDLLEQLQFFHIVASLSFAL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2442 384 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 381 IPR029063 -
Aed4g2442 384 Gene3D Vaccinia Virus protein VP39 30 310 IPR029063 -
Aed4g2442 384 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 8 382 - -
Aed4g2442 384 Pfam SAM dependent carboxyl methyltransferase 59 380 IPR005299 GO:0008168
Aed4g2442 384 Gene3D - 16 363 IPR042086 -
Aed4g2442 384 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 382 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2442 Aed-Chr4 26601667 26604966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2442 K18848 - gmx:100801476 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2442 4 26601667 26604966 Aed4g2442 4 26601667 26604966 ECH
Aed4g2442 4 26601667 26604966 Aed3g2547 3 27705131 27708427 PCT