Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2547 ATGGGAGTGGGAGACAATAATGATGTTGTTGTGTCGAATATGGAACTGGAGAAGCTGCTTAGCATGAAAGGAGGGAAAGGAGAAGCCAGCTATGCGAACAACTCTCAAGCACAGGCGATACATGCGAGGTCGATGCTACACCTTCTCAGAGAGAGTCTAGACAGAGTTGAGCTTGTGGATCCACGTGATGAAGTGGCGGCGCCATTTGTGGTGGTGGACTTGGGCTGTTCCTGTGGCACCAACACCATAAACGTGATGGATGTAATGGTGAACCACGTGATCAAAAGGTACGAGGCGTTGGGCTGGCAGCCACCGGAGTTCTCGGGTTTCTTCTCAGACCTTCCAAGCAATGACTTCAACACACTCTTCCAGCTCCTTCCTCCTCTCGCTAACAACTACTATGGCGTCAGCATGGAGGAATGCCTTGCTGCCAACAACCACCGCTCCTACTTTGCCGCCGGAGTTCCCGGTTCTTTCTACCGGAGGCTTTTTCCGGCTACTTCGGTTCATGTTTTCCACTCAGCCTTCTCTTTACACTGGCTATCTCAGGTGCCAGAATGTGTAGTGGAGAAGAGGTCAAGTGCATATAACAAAGGAAGGGTGTTTATCCATGGGGCTGGTGAGGCCACAACAAATGCCTACAAGAAACAATTCCAAACAGACTTGGCAGGGTTTCTTAAGGCAAGGTCAGTGGAAATGAAAAGAGAGGGATCAATGTTCTTAGTTTGCTTGGGCAGAACTTCAGTGGACCCCACAGACCAAGGTGGGGCTGGCCTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTGATTAGCCAAGAAAAACGAGACAGTTTTAACATTCCAGTTTATGCAGCCAGCCTGCAAGACTTCAAAGAGGTGGTTGAGGCTAATGGTTCATTTGCCATAGACAAGCTTGAGGTGTTCAAAGGAGGAAGCCCCCTTGTGGTGAATCAACCTGATGATGCAAGTGAAGTAGGCAGGGCTCTAGCCAACAGCTGCAGGACTGTGTGTGGAGTCCTTGTTGACGCACACATTGGTGACAAACTAAGTGAGGAACTTTTTCTCAGAGTTGAGCATCGAGCCACTAGTCATGCCAAAGAGCTACTAGAGCAACTACAGTTCTTTCACATAGTTGCTTCACTTTCTTTTGCTCAATGA 1182 0.4882 MGVGDNNDVVVSNMELEKLLSMKGGKGEASYANNSQAQAIHARSMLHLLRESLDRVELVDPRDEVAAPFVVVDLGCSCGTNTINVMDVMVNHVIKRYEALGWQPPEFSGFFSDLPSNDFNTLFQLLPPLANNYYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPATSVHVFHSAFSLHWLSQVPECVVEKRSSAYNKGRVFIHGAGEATTNAYKKQFQTDLAGFLKARSVEMKREGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISQEKRDSFNIPVYAASLQDFKEVVEANGSFAIDKLEVFKGGSPLVVNQPDDASEVGRALANSCRTVCGVLVDAHIGDKLSEELFLRVEHRATSHAKELLEQLQFFHIVASLSFAQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2547 393 Gene3D - 20 374 IPR042086 -
Aed3g2547 393 Gene3D Vaccinia Virus protein VP39 34 319 IPR029063 -
Aed3g2547 393 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 11 391 - -
Aed3g2547 393 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 390 IPR029063 -
Aed3g2547 393 Pfam SAM dependent carboxyl methyltransferase 66 389 IPR005299 GO:0008168
Aed3g2547 393 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 11 391 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2547 Aed-Chr3 27705131 27708427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2547 K18848 - gmx:100805902 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2547 3 27705131 27708427 Aed3g2547 3 27705131 27708427 ECH
Aed4g2442 4 26601667 26604966 Aed3g2547 3 27705131 27708427 PCT