Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2395 ATGGCCACTTGTGTCGATTCCCCAACAACCCCTCTTTCTCGGAAACCTAATGCCTCCCAACCCGACGACCGTTCTTTCAATTACCTCAAATTCTGCCGACCACCCTCTTTCTCCGATCGTCTTCCCTGCATACCCATTTGCAAGCATCGCGACACCGCCTCCTTCACACGTGTGGAGGAGGACGATAATGATGTCGTCGAGGGTGTTGTTGCTGTCGTTGACCTTTGGTTGAAGATTCAAGAGGAAGCAAGGCTTGATGTTGATCAAGAACCCATTTTGTCTGGCTACTATTTCAGTTCCATTTTGTCTCACAAATCCTTCGAGAGTGCCTTGGCTAACCACCTCTCCACCAATTTGAGCAGCTTGAGCCTCCCAAGCACCACCCTTTTTGATCTTTTCTTGGGTGTCTTGGTTGATGATGGAGATGACATCATGGGTGCTGTGAAGGATGATTTGGTAGCTGTTAAGGAGAGGGACCCTGCTTGCATTAGTTATGTGCATTGCTTGTTGAATTTCAAAGGGTTTTTGGCATGCCAGGCTCATAGGATTGCTCACAAATTGTGGCTACAAGGGAGGAAGGTCTTGGCACTGTTGATTCAGAATAGGGTGTCTGAGGTTTTTGCCGTGGATATTCACCCTGGTGCCAAAATTGGACGTGGGATTCTCTTGGATCATGCAACAGGGCTTGTTGTTGGGGAGACTGCAGTTATTGGGAACAATGTTTCAATTTTGCATAATGTGACATTGGGAGGGACTGGTAAGGCCAGTGGGGATAGACACCCTAAGATTGGTGATGGTGTTTTGATTGGTGCAGGGACTTGTATTTTGGGGAACATTAAGATTGGTGATGGTGCTAAGATTGGTGCTTGTTCTGTTGTGTTGAAGGATGTGCCACCAAGGACTACTGCTGTTGGGAACCCTGCTAGGTTGGTTGGAGGGAAGGATAACCCTATTAAGTTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCTTGGTCTGATTATGTTATCTAG 1017 0.469 MATCVDSPTTPLSRKPNASQPDDRSFNYLKFCRPPSFSDRLPCIPICKHRDTASFTRVEEDDNDVVEGVVAVVDLWLKIQEEARLDVDQEPILSGYYFSSILSHKSFESALANHLSTNLSSLSLPSTTLFDLFLGVLVDDGDDIMGAVKDDLVAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKDVPPRTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTSWSDYVI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2395 338 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 269 297 IPR018357 GO:0016740
Aed4g2395 338 CDD LbH_SAT 207 307 IPR045304 -
Aed4g2395 338 Pfam Serine acetyltransferase, N-terminal 75 180 IPR010493 GO:0005737|GO:0006535|GO:0009001
Aed4g2395 338 TIGRFAM cysE: serine O-acetyltransferase 148 309 IPR005881 GO:0005737|GO:0006535|GO:0009001
Aed4g2395 338 Gene3D Hexapeptide repeat proteins 210 330 - -
Aed4g2395 338 PANTHER SERINE ACETYLTRANSFERASE 1 338 - -
Aed4g2395 338 PANTHER SERINE ACETYLTRANSFERASE 1 338 - -
Aed4g2395 338 Gene3D serine acetyltransferase, domain 1 62 209 IPR042122 -
Aed4g2395 338 MobiDBLite consensus disorder prediction 1 22 - -
Aed4g2395 338 SUPERFAMILY Trimeric LpxA-like enzymes 75 312 IPR011004 -
Aed4g2395 338 Pfam Bacterial transferase hexapeptide (six repeats) 260 294 IPR001451 -
Aed4g2395 338 SMART SATase_N_2_a 75 180 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2395 Aed-Chr4 26251777 26252793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2395 75 336 Miscellaneous Gene Families AT2G17640 52.672 1.08e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2395 K00640 - gmx:606507 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2395 4 26251777 26252793 Aed4g2395 4 26251777 26252793 ECH
Aed4g2395 4 26251777 26252793 Aed3g2581 3 27915730 27916776 PCT