Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2363 ATGTCGGAAAAGGGTCGGCCACTTCCAAAATTTGGTGAATGGGATGTCAACGATCCAGCCTCGGCTGAGGGGTTTACAGTGATTTTTAATAAGGCCAGGGATGAGAAAAAAACAGGTGGAAATCCTGAGTCACCAGCAAAGACTGCAGCTGATCCTCATAGCAAACCTGCAGTAGATCCTGGCAAAACTCAGACTAAAAAATGGTTTTGCTGCATGCAAAACCCTTCTGCGGAATCATAG 240 0.4583 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPAKTAADPHSKPAVDPGKTQTKKWFCCMQNPSAES 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2363 79 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Aed4g2363 79 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED 2 65 - -
Aed4g2363 79 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 2 65 IPR040387 -
Aed4g2363 79 MobiDBLite consensus disorder prediction 31 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2363 Aed-Chr4 26024519 26028361 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2363 - - gmx:100305826 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2363 4 26024519 26028361 Aed4g2363 4 26024519 26028361 ECH
Aed4g2363 4 26024519 26028361 Aed3g2598 3 27978978 27979713 PCT