Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2362 ATGGGAAGAGTTGAGTACTCTCCATTGTTTGAGACAAAAAGGGGCAGAGGAAGGTTCATCTATAGGTTCTTTGCAATCTCATTATTTGTGGCCATATGCTTCATATGGGTTTATAGATTTAGCCACATAACAAAGGTTGAGGATGGAAAATGGGCATGGCTTGGTATGCTTGGTGCAGAGCTCTGGTTTGGTTTTTATTGGGTCCTCACTCTAGCCATCAGATGGAACCCTGTATTCAGACAACCCTTTAGAAACAGACTCTCTCAAAGATATGAGAAAAAGTTGCCAAAAGTGGACATATTTGTGTGCACAGCAGACCCGGATATGGAGCCACCAATGATGGTGATTAATACAGTGCTATCTGTTATGGCTTATGACTATCCAACTGAGAAATTGAGTGTGTATCTCTCTGACGACGCTGGGTCACAAATCACGTTCTATGGTCTGCTAGAGGCTTCAAACTTTGCAAAATATTGGATCCCATTTTGCAAGAGGTTCAATGTGGAACCAATGTCACCAGTTGCATATTTTAAAAGCTTAGTCTCATCATCAGGTTACCCTAGTGACCCAAGTCAAGCCAAAGAGCTGGGAGCTATCAAGAAAATGTACGACGAGATGGAAAGACGCATTGAAGATGCAACCACGTTCGGTGAAGTACCCAAAGAAGCACGTTTAAAGCATAAGGGGTTTTCTCAGTGGGATTCAAATTCTTCTAGACGTGACCATGACACAATTCTTCAAATACTACTTCATAAAAAGGACCATAATAATAATTCAAAAGATGTAGATGGGTTGGTTTTGCCAACTCTGGTGTATTTGGCTCGTGAGAAGAGACCCCAATATTTCCACAACTTTAAAGCTGGAGCTATGAATTCATTGTTAAGGGTGTCTTCAAATATCAGTAATGGGAAAATAATTCTAAATGTAGACTGTGACATGTACTCAAACAACTCACAATCTGTGAGAGATGCTCTCTGTTTTTTCATGGATGAAGAGAAAGGACAAGAAATTGCCTACGTGCAGTTTCCTCAGACTTTTGAGAATACCACTAAGAATGATTTATATGGGGGTGCTCTAATAGCAATATTCGAGATGGGTTTAAAATATGGGTGTCCAGTGGAGGATGTGATAACAGGATTGTCTATACAGTGCCAAGGATGGAAATCAGTATACTACAACCCAACAAGGAAGGCTTTCTTAGGCATAGCTCCAACTACATTGCCTCAAACACTTGTTCAGCACAAAAGATGGTCTGAAGGAGACTTGCAAATTTTGCTCTCTAAATACAGTCCTGCATGGTATGGTTTTGGAAGGATCAATTTTGGACTCCAAATGGGATATAGTGTCTATTGCTTATGGGCACCTAATTGCTTTGCAACACTATACTATTCTATCATCCCTTCACTGTACCTCTTTAAAGGCATTCCCTTGTTTCCGAAGATGTCAAGTCTATGGTTCATACCTTTTGCATATGTCATTGTTGGGGAAACTACTTATAGTTTGTTGGAGTTTTTCTTCTGTGGGGGCACATTTCAAGGTTGGTGGAATGACCTACGGATATGGCTATACAAAAGAACTAGCTCTTACCTATTTGCCTGCATTGACACCATCTTGAAGCTTTTTGGGTTCTCAGAATCAACTTTTACAATCTCAACTAAGGTTACTAAAGAAGATGCTTCCAAACGCCATGAGAAAGAGATAATGGAGTTTGGAATCTCCTCTCCAATGCTCACTATATTGGCCACTCTTGCATTACTTAATCTATTTTGTTTCCTTAGTGTGTTGAAGGATGCAATCCAAAGTGAAGGTGACATTGGAGCTTATGAGACAATGGGGTTGCAAGTTCTACTATGTGGTTTTCTTGTTTTCATCAATTTGCCTATATATCAAGGACTTTTCTTAAGGAAGGACAATGGAAGATTGCCTAGCTTTGTTGCCATCAAATCAATAGTAGAAAAGAGAAATGCGGAAAGAAGTAATGGTTTGACATTTAGTGGCCAAATCAGCAAGAGAGTGAGTCACATACCAAGAGAAGGTGAAGATGGGAAATGGGCTTGGATTGGCTTGCTTTGTGCTGAACTATGGTTTGGCCTTTATTGGCTCCTCAGACACCCTTTCAGATGGAACCTTCTCTTCAGGGAACCTTTTAGACAAAGACTCTCTCAAAGATATGAGGAGATATTGCCAAGAGTGGACATGTTTGTGTGCACAGCAGATCCAGGGATTGAGCCAGCAGTGATGGTGATTAACACAGTGCTATCAGTTATGGCTTATGACTATCCAAAAGAGAAACTGAGTGTATATCTTTCAGATGATGCTGCTTCTGATATTACTTTCTATGCTCTCCTTGAGGCTTCTATCTTTGCCAAACATTGGCTTCCATTTTGCAAGAAATTCAGGGTGGAACCCACCTCACCAGCTGCATATTTCAAAAGTAGTATTGCCTCATGCACTCACCCAAATAATATTGAGGCTAAAGAAAAAGAATTGGTCTCTATCAAGAAATTGTACCAAGATATGGAAAGTCGAATAGAAAATGTAGCTAAGGTAGGTCAAGTGCCCAAAGAAATACGTTCAAAGAATAAAGGATTTTCTCAGTGGAATTCATATTCTTCTCGACGTGATCATGACACAATTCTTCAAATATTACTTCATGGAAGGGATTCGAGTGCCAAAGATGTAGATGGGAATGTTATGCCTATATTGGTATATTTGGGTCGTGAGAAGAGACCCCAAGTTGCACATAACTTCAAAGCTGGAGCTATGAATTCATTGATAAGGGTGTCATCAATGATTAGCAATGGGGAAATTATTCTTAATGTAGATTGTGACATGTACTCAAACAATTCCCAATCTCTAAGGGATGCACTCTGCTTCTTCATGGATGAAGTTAAAGGCCATGAAATCGCTTTTGTGCAGACTCCACAGTGTTTTGAGAATGTCACAAAGAATGATCTATATGGTGGTGCTCTACGAGTAATTTATGAGGTTGAATTCCATGGTTTAGATGCACTTGGTGGGCCTTTTTATATTGGAACTGGCTGCTTTCACAGAAGAGAGATACTATGCGGAAGAAAGTTGAATGACCAAAACAAGAATGATTGGAATGAGTATAAGAATATTGATCATATGAAAGAAGCAAGCTTGCTTGAACTGGAAGAAAAATCAAAGGCTCTTGCTAGTTGTACCTATGAGGAAAACACATCATGGGGAAAAGAGATGGGACTGCAATATGGTTGTGCAGTAGAGGATGTGATAACAGGATTGTCCATTAAATGCCGAGGATGGAAATCAGTGTACTATAATCCTCAAAGGAGAGCTTTTTTAGGTGTAGCTCCAACCACCTTGCCAGAAGCACTAGTTCAACATAAGAGATGGTCTGAAGGAGGCTTTCAAATTCTGCTTTCTAAGTATAGTCCTGTATGGTATGCTCATGAATTGATCAGTTCTGGCCTCCAAATGGGATATTGTTACTATAATCTATGGATGTCAAGTCCATGGTTCATACCATTTGCATATGTTACGCTTGGCGATTCCTCATACTGCCTGTTGGAGTTTTTATGGTCAGGAGGCACAATCCAGGGTTGGTGGAATGACACAAGGATGTGGCTTTATAAGAGAACAAGCTCCTACCTCTTTGCTTTTGTTGATACCATCTTGAAGTTTTTCGGGTTTTCAGAATCAGCCTTTGTGATATCTGCAAAGGTAGCTGAAGAAAACGTTTCCCAAAGATATGAGAAAGAAATCATGGAGTTTGGAAACTCATCCCCAATGCTTACTTTACTTGCAACACTTGCATTGCTCAATTTGTTTTGTCTTCTTGGCATGTTACTGAAGCAAGTATTCATGAGTGAAGGGGGTCTCAGAATTTGTGAGAAAATGGCATTGCAAGTTCTACTAAGTGGAGTTTTGGTTCTCATCAATGTGCCTGTGTACCAAGGCCTCTACCTAAGAAAAGACAAGGGAAGATTGCCAATATCTGTTGCAGTTAAATCAACAACATTGGCTCTAAGTGCATTGAAAGAGATGAAGCTGTGGCTATCAAATTTTGCCACTGCAATGGTAATATTTTCCAGCCTGAATGCAGTGTTTGGGATCAGATTTGTGATTGACAGAGAAGAATGTTTCTCTCATAATGTTCAATATGAAGGGGATAGAGTCCATTCTTCATTTGTTGTGATCAAGGTTGATACATCTTGGCAATATACTCATGATGGTGTAGACCTTTCGGTGAAGGGACCCACTGGTGAACCAATTAAAGATTTTCATGACATGACAAGTGAAATATTCGAATTTGTGGCTCGAAGCAGTGGACCCTATCGGTTCTGCTTCATCAACAAGTCTCCCTATCATGAAACAATTGATTTTGATGTCCATTCTAACCACATTCAGTTCACTGAACAGCATGCAAAAGATGAGCATTTAAACCCTTTGTTGGATCAGATAATAAAGTTGGAGCAAGCTCTTTTCAACATTCAGTATGAACAGCATTGGCTTGAGGCTCAGACAGAACGCCAGGCAATAGTAAGCAATGCAATGAGCTCGAGAGCAGTTTACAAGGCCGTACTTGAATCAGCAGCACTAATAGGTGCCAGCGCCCTCCAAGTTTATCTTCTTCGTCGCCTTTTTGAAAGAAAGCTTGCAGCATGA 4650 0.4013 MGRVEYSPLFETKRGRGRFIYRFFAISLFVAICFIWVYRFSHITKVEDGKWAWLGMLGAELWFGFYWVLTLAIRWNPVFRQPFRNRLSQRYEKKLPKVDIFVCTADPDMEPPMMVINTVLSVMAYDYPTEKLSVYLSDDAGSQITFYGLLEASNFAKYWIPFCKRFNVEPMSPVAYFKSLVSSSGYPSDPSQAKELGAIKKMYDEMERRIEDATTFGEVPKEARLKHKGFSQWDSNSSRRDHDTILQILLHKKDHNNNSKDVDGLVLPTLVYLAREKRPQYFHNFKAGAMNSLLRVSSNISNGKIILNVDCDMYSNNSQSVRDALCFFMDEEKGQEIAYVQFPQTFENTTKNDLYGGALIAIFEMGLKYGCPVEDVITGLSIQCQGWKSVYYNPTRKAFLGIAPTTLPQTLVQHKRWSEGDLQILLSKYSPAWYGFGRINFGLQMGYSVYCLWAPNCFATLYYSIIPSLYLFKGIPLFPKMSSLWFIPFAYVIVGETTYSLLEFFFCGGTFQGWWNDLRIWLYKRTSSYLFACIDTILKLFGFSESTFTISTKVTKEDASKRHEKEIMEFGISSPMLTILATLALLNLFCFLSVLKDAIQSEGDIGAYETMGLQVLLCGFLVFINLPIYQGLFLRKDNGRLPSFVAIKSIVEKRNAERSNGLTFSGQISKRVSHIPREGEDGKWAWIGLLCAELWFGLYWLLRHPFRWNLLFREPFRQRLSQRYEEILPRVDMFVCTADPGIEPAVMVINTVLSVMAYDYPKEKLSVYLSDDAASDITFYALLEASIFAKHWLPFCKKFRVEPTSPAAYFKSSIASCTHPNNIEAKEKELVSIKKLYQDMESRIENVAKVGQVPKEIRSKNKGFSQWNSYSSRRDHDTILQILLHGRDSSAKDVDGNVMPILVYLGREKRPQVAHNFKAGAMNSLIRVSSMISNGEIILNVDCDMYSNNSQSLRDALCFFMDEVKGHEIAFVQTPQCFENVTKNDLYGGALRVIYEVEFHGLDALGGPFYIGTGCFHRREILCGRKLNDQNKNDWNEYKNIDHMKEASLLELEEKSKALASCTYEENTSWGKEMGLQYGCAVEDVITGLSIKCRGWKSVYYNPQRRAFLGVAPTTLPEALVQHKRWSEGGFQILLSKYSPVWYAHELISSGLQMGYCYYNLWMSSPWFIPFAYVTLGDSSYCLLEFLWSGGTIQGWWNDTRMWLYKRTSSYLFAFVDTILKFFGFSESAFVISAKVAEENVSQRYEKEIMEFGNSSPMLTLLATLALLNLFCLLGMLLKQVFMSEGGLRICEKMALQVLLSGVLVLINVPVYQGLYLRKDKGRLPISVAVKSTTLALSALKEMKLWLSNFATAMVIFSSLNAVFGIRFVIDREECFSHNVQYEGDRVHSSFVVIKVDTSWQYTHDGVDLSVKGPTGEPIKDFHDMTSEIFEFVARSSGPYRFCFINKSPYHETIDFDVHSNHIQFTEQHAKDEHLNPLLDQIIKLEQALFNIQYEQHWLEAQTERQAIVSNAMSSRAVYKAVLESAALIGASALQVYLLRRLFERKLAA 1549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2362 1549 Coils Coil 823 843 - -
Aed4g2362 1549 Pfam Cellulose synthase 1173 1337 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed4g2362 1549 Pfam Cellulose synthase 98 367 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed4g2362 1549 Pfam Cellulose synthase 731 1033 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed4g2362 1549 Pfam Cellulose synthase 1055 1146 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed4g2362 1549 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 677 1163 - -
Aed4g2362 1549 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 364 649 - -
Aed4g2362 1549 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1163 1339 - -
Aed4g2362 1549 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 6 364 - -
Aed4g2362 1549 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 677 1163 - -
Aed4g2362 1549 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 364 649 - -
Aed4g2362 1549 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1163 1339 - -
Aed4g2362 1549 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 364 - -
Aed4g2362 1549 Pfam emp24/gp25L/p24 family/GOLD 1372 1544 IPR009038 -
Aed4g2362 1549 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 721 812 IPR029044 -
Aed4g2362 1549 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 171 IPR029044 -
Aed4g2362 1549 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 365 IPR029044 -
Aed4g2362 1549 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 878 1031 IPR029044 -
Aed4g2362 1549 ProSiteProfiles GOLD domain profile. 1373 1460 IPR009038 -
Aed4g2362 1549 SUPERFAMILY Nucleotide-diphospho-sugar transferases 113 476 IPR029044 -
Aed4g2362 1549 SUPERFAMILY Nucleotide-diphospho-sugar transferases 748 1173 IPR029044 -
Aed4g2362 1549 SMART EMP24_GP25L_2 1365 1544 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2362 Aed-Chr4 26009462 26024694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2362 364 651 Glycosyltransferase AT1G55850 60.417 5.30e-111 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2362 - - gmx:100785532 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2362 4 26009462 26024694 Aed4g2362 4 26009462 26024694 ECH
Aed4g2362 4 26009462 26024694 Aed3g2599 3 27979862 27990491 PCT