LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g2361	ATGGTAGCAAAAATCCGGCAAAGTGCTACTGAGTCTCCTTCTCCTAATCCAAAACCTGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTTTCTGGTGAAAAACCTTTCATTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACCCAACTTCATGTAGCCCAAAAAGAGATGAACAAGTTAAGGGAACACGTAAAGAATGCTGAAACTACTAAGGCTCAAGCTCTTGTGGAGCTTGAGAGGGCTAAAAGAACAGTTGAGGATCTGACACAAAAGATAAAAGTTATCAGTGATTCTAGGGAGTTAGCAATCAAGGCAACAGAAGCTGCAAAGAGTCAGGCAAAACAACTTACAGAAGAAAAGTATGGTGTCCCTGATGAAACAAATGGTTCTTGGAAGGAAGAGTTAGAAGCTGCTGTTAAAAGGTATACATCTGTCATGACAGAACTTGATGCTGCAAAACAAGAACTGAGCAAGACTCGGCAAGAGTATGATTCATCCTTGGATGCAACAAAGTCTGCCTTCAAGCAAGCAGCAGAAGCTGGAGATGCAGTGAAGGAAAACACAGAAAGATCATCCGAGCTTTCCAAAGAAATTTCAGCTGTAAAGGAGTCAATTGAGCAAGCAAAGCTTGCATCTACCGTAGTACAGCAACAGCAAGCAATGATTTTAGCTGAGAAAGATGTTCTAAGACAATCATATAAAGCTACCTTGGAACAATCTGAAAAGAAATTGCTTGCTTTAAAGAAGGAATTCAGTCCCGAGCTTGCCAAAAATCTTGAAATGCAGCTGGCTGAGACAACTAGTGAAATTGGTGCTCTGCAAAAGGAAATGGAAAATAAAAGGACATCAGACTTGGATTCTGTGAAAAGTGTCACTTTGGAGCTAGATGATGCTAAGGAGTCTTTGCAGAAAGTAGCAGATGAGGAAAGCTCTCTTAGAAGCTTGGTGGAATCACTTAAGGTGGAACTGGAGAATGTAAAAAGAGAACATTCTGAATTGAAGGAGAAAGAATCTGAAACTGAATCCATTGTTGGGAATTTGCATGTCAAGCTCCGCAAAAGCAAGTCTGAGCTTGAAGCCTGCATGGCAGGAGAATCTAAAGTTAGAGGTGCATCCGAGGAAATGATCTCGACACTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCGGGAAGCAGAAGATATGAAGAACAGGACAGCAGAATTGAAGAAGGAAGTTGAACTTACCATGCTTGCATTAGAAGAAGCAGAGAAAAAGCTTAAAGTGGCGCTGGAAGAAGCAGAAGCAGCGAAAACAGCTGAGAAAAGTGCTATTGACCAGATTACGGTGTTAACTGAAAGGACTACTGCTGCACGCGCATCAACATCTGAATCTGGTGCTGTGATTACAATCTCAAAGGAGGAGTTTGACTCGCTAAGCCATAAAGTTGAGGAGTCTGATAAATTAGCAGACATGAAAGTGGCTGCTGCCAAGGCACAGGTTGAAGCTGTGAAGGCTAGCGAAAATGAATCTCTCAAAAGGTTGGAGACAACTCAAAAGGAGATTGAGGATATAAAGACTGCAACACAGGAGGCTTTGAAAAAAGCTGAAATGGCTGAAGCAGCAAAAAAGGCAGTGGAGAGTGAGCTTCGAAGATGGCGCGAGAGGGAGCAGAAAAAAGCTGCAGAAGCTGCATCTCGAATTCTGGCTGAAACACAGGTGTCAACAGAATCATCTCCTCAGCACTATAGGATCCAAAAGCAGAATCCGCCCCATACAATGATGGAGGTGAAGAAGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAGAAAGCCCTCTTGCCTAACATTAGTGGCATCTTCCAAAGGAAGAAAAACCAGGTTGAGGGTGGTTCTCCTTCTTATCTGCCCGGTGAGAACCCTGTATGA	1968	0.4284	MVAKIRQSATESPSPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPFIKKAKPYSAERVLAKETQLHVAQKEMNKLREHVKNAETTKAQALVELERAKRTVEDLTQKIKVISDSRELAIKATEAAKSQAKQLTEEKYGVPDETNGSWKEELEAAVKRYTSVMTELDAAKQELSKTRQEYDSSLDATKSAFKQAAEAGDAVKENTERSSELSKEISAVKESIEQAKLASTVVQQQQAMILAEKDVLRQSYKATLEQSEKKLLALKKEFSPELAKNLEMQLAETTSEIGALQKEMENKRTSDLDSVKSVTLELDDAKESLQKVADEESSLRSLVESLKVELENVKREHSELKEKESETESIVGNLHVKLRKSKSELEACMAGESKVRGASEEMISTLSQLTSETENARREAEDMKNRTAELKKEVELTMLALEEAEKKLKVALEEAEAAKTAEKSAIDQITVLTERTTAARASTSESGAVITISKEEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENESLKRLETTQKEIEDIKTATQEALKKAEMAEAAKKAVESELRRWREREQKKAAEAASRILAETQVSTESSPQHYRIQKQNPPHTMMEVKKFEKEKVSVSKKALLPNISGIFQRKKNQVEGGSPSYLPGENPV	655

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g2361	655	Coils	Coil	250	270	-	-
	Aed4g2361	655	Coils	Coil	529	577	-	-
	Aed4g2361	655	MobiDBLite	consensus disorder prediction	399	418	-	-
	Aed4g2361	655	Coils	Coil	308	363	-	-
	Aed4g2361	655	MobiDBLite	consensus disorder prediction	636	655	-	-
	Aed4g2361	655	MobiDBLite	consensus disorder prediction	585	602	-	-
	Aed4g2361	655	Coils	Coil	211	231	-	-
	Aed4g2361	655	MobiDBLite	consensus disorder prediction	202	218	-	-
	Aed4g2361	655	MobiDBLite	consensus disorder prediction	196	218	-	-
	Aed4g2361	655	Coils	Coil	70	139	-	-
	Aed4g2361	655	Pfam	Weak chloroplast movement under blue light	23	573	IPR008545	-
	Aed4g2361	655	Coils	Coil	392	454	-	-
	Aed4g2361	655	PANTHER	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED	3	632	-	-
	Aed4g2361	655	Coils	Coil	152	189	-	-
	Aed4g2361	655	Coils	Coil	276	303	-	-
	Aed4g2361	655	MobiDBLite	consensus disorder prediction	585	605	-	-
	Aed4g2361	655	PANTHER	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED	3	632	-	-
	Aed4g2361	655	MobiDBLite	consensus disorder prediction	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g2361	Aed-Chr4	26001575	26006277	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g2361	-		-	gmx:100794569	1013.83

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g2361	4	26001575	26006277	Aed4g2361	4	26001575	26006277	ECH
	Aed4g2361	4	26001575	26006277	Aed3g2600	3	27993475	27996727	PCT