Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2600 ATGGTAGCCAAAATCAGGCAAAGTTCTGCTAACTCTCCAAATCCATCAAAACCAGTGGTTGGAGAGATTGACACCAGTCCACCTTTTCAATCTGTTAAAGATGCTGTTTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAACACCTCCCAATGCTCCCATTAAGAAGGCAAAATCTTATTTTGCCGAGAGTGTTTGGGCAAAGGAGAGACAACTTCACTTAGTCCAGAAAGAGCTGAAAAAATTAAAGGAACAACTAAAGAATGCAGAAACTACCAAGGCTCAAGTCCTGGTGGAGCTTGAAAAGTCTACAAGAGTGGTTGAGGATCTCTCACAAAAGCTTAAAGTTCTTAGTGAATCCAGAGAATCAGCAATTCAGGCAACAGAAGCTTTGAAAAGTCAGGCAAAACAGCTTAAAGAACAAAATTGTGGTGATCCTGATGGAACCAATGGTGCTAGGAAAGAAGAGTTAGAAACTGCCGTTAATAGTTATGCATTTATCATCACAGAACTTGATGCTGCAAAGCAAGAACTGAATAAAATTCGTCAGGGGTATGATTTATCCTTGGAAGCAAGAGTTTCTGCTCTCAAGCAAGCAGCAGAAGCTGAAGATGCAATGAAGGCGAACACCAAAAGAGCATCGGAGCTATCTAAAGAAATTTTGGCCGTACAGGAATCAATTGAGCAAATGAATGCTGAAGCTGTCCAAGCACATCAACTGCAAGAAGAGACATTAGCCGAGCAAAATATTCTTAGACAATCATATGAAGCCACCATCGAAGAATTAAACAAGAAGTTGCTTGATTTAAAGAAGGAATTTAATCCACAACTTACCAAAAATCTTGAAGTGCAGCTGACTGAGACAGTGAGTGAAATTGGGGTTCTGCAAAAGCAAATTGAAAATAAAAAGACATCAGACTTGAACTCTTTGAGAGGTGTCACTCTGGAGCTTGATGATGCTAAGGAATCATTGCAGAAAGTAGCAGGAGAGGAAGACTCCCTTAGAAGCATGGTGGAAGCTCTTAGGATGGAGCTGGAGAATGTAAAAAGAGAACACTCTGAATTGAAGGAGAAAGAATCCAAAACTGAATCCATTGCTGAGAATCTGCGTGTAGAGCTCCAGAAAAGTGAGTCTGAACTTGAAGCCTACTTGGCAGAAGAATCTGAAGCTAGAGATGCATCAGAGGAAATGATCTTGAAATTGAGTCAGTTGTTGTCTGAAACTGAAAGTGCAAAGAGGGAAACAGAAGATATGAAGAATGAGGCAGCAGAATTGAAGATGGAAGCTGCAGTCACTAAACTTGTGTTAGAAGATACAGAAATGAAGCTTAAAGTGGCATTGGAAGAAGTGGAAGCAGCTAAAGCAGCAGAGGCAAGTGCTCTTGATCAGATTAAGGTGTTATCTATGAGGGCTAGTGCTTCTCATTCATCGACTTCTGAACCTGGTGCAAGAGTTACAATCTCAAGGGAGGAGTTTGAATCCTTAGTTCATAAGGTGGAGGAGTCTGATAAATTAGCAGACATCAAAGTGGCTGCTGCCACGGCACAGGTTGAAGCTGCAAAGGCTGGCGAAAATGAAGTTCTGATAAGGGTAGAGGAAACTCAAAAGGAAATTGAGGATATGAAGAGGGAAACACAGGCAGCCTTGAAAAGGGCTGACATGGCTGAAGCAGCAAAGAGGGCGGTGGAGGGTGAGCTAAGAAAGTGGCACGAACGAGAGCAGAAGAAAGCCGCAGAAGCTGCATCGCGAATATTGGCCGAAACACAGATGTCACCAGAACTATCTCCTCCAAACAAGGTGGAGATGAGGAAGTTAGAAAAGGGGAAGGTGTTAGTTTCAAAGAAAGTTCTCTTGCCAAGTATCAGTGGCATCTTTCACAGGAAGAGGAACCAGGTTGAGGGAGGATCTTCTTCTTAG 1917 0.4236 MVAKIRQSSANSPNPSKPVVGEIDTSPPFQSVKDAVSLFGEGAFSGETPPNAPIKKAKSYFAESVWAKERQLHLVQKELKKLKEQLKNAETTKAQVLVELEKSTRVVEDLSQKLKVLSESRESAIQATEALKSQAKQLKEQNCGDPDGTNGARKEELETAVNSYAFIITELDAAKQELNKIRQGYDLSLEARVSALKQAAEAEDAMKANTKRASELSKEILAVQESIEQMNAEAVQAHQLQEETLAEQNILRQSYEATIEELNKKLLDLKKEFNPQLTKNLEVQLTETVSEIGVLQKQIENKKTSDLNSLRGVTLELDDAKESLQKVAGEEDSLRSMVEALRMELENVKREHSELKEKESKTESIAENLRVELQKSESELEAYLAEESEARDASEEMILKLSQLLSETESAKRETEDMKNEAAELKMEAAVTKLVLEDTEMKLKVALEEVEAAKAAEASALDQIKVLSMRASASHSSTSEPGARVTISREEFESLVHKVEESDKLADIKVAAATAQVEAAKAGENEVLIRVEETQKEIEDMKRETQAALKRADMAEAAKRAVEGELRKWHEREQKKAAEAASRILAETQMSPELSPPNKVEMRKLEKGKVLVSKKVLLPSISGIFHRKRNQVEGGSSS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2600 638 Coils Coil 245 272 - -
Aed3g2600 638 Coils Coil 331 393 - -
Aed3g2600 638 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 4 592 - -
Aed3g2600 638 Coils Coil 401 428 - -
Aed3g2600 638 MobiDBLite consensus disorder prediction 1 19 - -
Aed3g2600 638 Coils Coil 199 243 - -
Aed3g2600 638 Coils Coil 524 558 - -
Aed3g2600 638 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 4 592 - -
Aed3g2600 638 Coils Coil 436 456 - -
Aed3g2600 638 Coils Coil 65 141 - -
Aed3g2600 638 MobiDBLite consensus disorder prediction 1 27 - -
Aed3g2600 638 Pfam Weak chloroplast movement under blue light 22 575 IPR008545 -
Aed3g2600 638 MobiDBLite consensus disorder prediction 569 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2600 Aed-Chr3 27993475 27996727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2600 - - gmx:100817643 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2600 3 27993475 27996727 Aed3g2600 3 27993475 27996727 ECH
Aed4g2361 4 26001575 26006277 Aed3g2600 3 27993475 27996727 PCT