Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2328 ATGGATGACAAAACCTCTCTCCCAATTGATACAAGTACTGCTGCTGGTACTTATGATGACGATGGGCATGCCAAAAGGACTGGAACTTTATGGAGTGCTGTGGCTCATATCATCACTGCTGTGATTGGTTCTGGTGTCCTATCTCTTGCATGGAGCACTTCCCAATTGGGGTGGATTGGAGGGCCAGTTGCCTTGTTTTGTTTTGCAACCATCACCTATGTTTCTTCATCCCTCCTTTCTGATTGTTATAGAACTCCTGACCCTGTCACTGGGAAAAGAAACTACTCATACATGGCTGCTGTTAGAGTCAATCTGGGTACTGAAACTACTCTTAAGGCAATTTTGAAAGCAAGTTGTTACCACAAGAAAGGGCATCAAGCTCCTTGTGGTTATGGGGGTGATTTGTATATGGTGTTGTTTGGAGTTGTTCAGATTGTGATGTCATTCATACCAGACCTCCATAACATGGTGTGGGTTTCAGTTGTTGCGGCAATTATGTCCTTTACATACTCCTTCATTGGACTAGGACTTGGCATAGCAAAAGTCATAGATAATGGAACAATTTTGGGGAGCATTACAGGAATACCAGCTACTAGCATTGCTAACAAATTATGGTTAGTCTTCGAAGCACTTGGTGACATGGCATTTGCCTATCCATACGCCTTGCTCCTTCTTGAGATACAGGATACTCTAGAGTCTACTCCACCAGAAAATAAAACCATGAAAAAGGCCTCCATGGTTGCAATCTTCATGACAACATTCTTCTACCTGTGCTGCGGATGCTTTGGATATGCAGCTTTTGGAAATGATACACCAGGAAACCTCTTGACAGGGTTTGGCTTTTATGAGCCTTATTGGCTTGTTGCCTTTGCTAATGCTTGCATTATAATTCATCTCGTGGGAGGATATCAGATGTACAGTCAACCAATATATACTGCTGCTGATAGATGGTGCTCAAGAAAATTCCCCGACAGTGTCTTTGCAAACAAGTTCTATACAGTGAAAGTGCCTCTATTCCCTGGTTATGAGTTAAATCTATCCAGGTTCTGTTTTAGAACAGCCTATGTGATTTCAACCACTGGAGTTGCAATTCTGTTTCCTTACTTCAACCAAGTTCTGGGAGTGTTGGGAGCCATAAACTTTTGGCCATTGGCTATATACTTCCCAGTAGAGATGTACTTACAACAAAAGAATATTAGAGCTTGGACTAGAAAATGGATTGTTCTTAGGATGTTTAGCTTTGCTTGCTTTCTTGTCACTGTTATGGGCTTAGTAGGGTCGATTCAAGGAATCATAAGTGAGAAACTTGGCTGA 1314 0.4193 MDDKTSLPIDTSTAAGTYDDDGHAKRTGTLWSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPVALFCFATITYVSSSLLSDCYRTPDPVTGKRNYSYMAAVRVNLGTETTLKAILKASCYHKKGHQAPCGYGGDLYMVLFGVVQIVMSFIPDLHNMVWVSVVAAIMSFTYSFIGLGLGIAKVIDNGTILGSITGIPATSIANKLWLVFEALGDMAFAYPYALLLLEIQDTLESTPPENKTMKKASMVAIFMTTFFYLCCGCFGYAAFGNDTPGNLLTGFGFYEPYWLVAFANACIIIHLVGGYQMYSQPIYTAADRWCSRKFPDSVFANKFYTVKVPLFPGYELNLSRFCFRTAYVISTTGVAILFPYFNQVLGVLGAINFWPLAIYFPVEMYLQQKNIRAWTRKWIVLRMFSFACFLVTVMGLVGSIQGIISEKLG 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2328 437 Pfam Transmembrane amino acid transporter protein 110 432 IPR013057 -
Aed4g2328 437 Pfam Transmembrane amino acid transporter protein 26 109 IPR013057 -
Aed4g2328 437 PANTHER OS05G0424000 PROTEIN-RELATED 108 435 - -
Aed4g2328 437 PANTHER OS05G0424000 PROTEIN-RELATED 17 109 - -
Aed4g2328 437 PANTHER AMINO ACID PERMEASE 7-RELATED 17 109 - -
Aed4g2328 437 PANTHER AMINO ACID PERMEASE 7-RELATED 108 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2328 Aed-Chr4 25728275 25731282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2328 2 419 Organic Solute Cotransporters AT1G77380 50.336 5.56e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2328 K24917 - gmx:100816934 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2328 4 25728275 25731282 Aed3g2622 3 28137371 28141590 PCT