Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2327 ATGAGGGAAGAAGGTTCAGGATATGACAGCACCCCGTTTTTGGATACCCAATATGGAGAATGTTACGTGGAAAGAACTGGGACAGTATGGACTGCAGTGGCACACATAGTGACAGGAGTGATAGGATCAGGAGTGTTGTCATTGGCATGGAGCATTGCACAGCTTGGATGGATTGGAGGACCGCTCACTATTATTTTCTTTGCTTCCATCACTCTCCTCTCTTCTTTCCTTCTCACCAACACTTACCGTTCTCCAGACCCTGAACTTGGCCCTCATAGGAGCTCCTCATACCTTGATGCTGTTAATTTGCATAAGGTCTGTTGGCATGACAATGGGAATGACGTAACATGTGGATTTGGGGATGGATATTTCATGCTTATTTTTGGGGCTGTGCAAGTTCTTCTCTCACAGATACCCAACTTCCATAATATTCAATGGTTGTCAATTCTTGCAGCATTTATGTCCTTTGCATATGCTTTCATAGGAATGGGGCTTTCCATCCAGCAAGTCAGAGTAAATGGACATGCTGAGGGTAGCATTGAAGGAATCCCTACTTCCAGTGGAATTGAAAAAGTATGGCTGATTGCTCAAGCACTTGGTGACATAGCATTCTCCTATCCATTCTCCGTAATTCTTATAGAAATACAGGATACTTTGAAGTCGCCTCCACCAGAAAACGTAACCATGAAGAGGGCCTCCACAATATCAGTCATTATCACAACATTTTTCTACCTCTTTTGTGGGTGTTTTGGATATGCAGCCTTTGGTAATGATACACCAGGAAACCTTTTAACAGGGTTTGCACTCTATACAAAATATTGGCTTGTAGACTTTGCCAATGCTTGTATAGTGATTCACCTAGTTGGTGCATACCAGGTGTATAGCCAGCCACTTTTTGCCAATGTTGAGAATTGGCTTCGTTTCAAGTTCCCAGACAGTGAATTTCTGAATCGCACATACCCCTTGAAACTCCCTTTGCTGCCAGTTTTCCCTCTAAACTTTCTCAGGATTACTTTTAGAACTGCATATGTTGCATCAACAACTGTGATTGCAATGATGTTTCCCTACTTCAATCAGATTTTGGGAGTTTTGGCTGGCATAATCTATTATCCATTATCTATATATTTTCCAGTGGAAATGTACTTGAGTAAGGGCAATATTGAAGCATGGACGGCTAAGTGGGTCATGCTTAGGACTTTTAGCATTTTTGGTTTTTTCTTGGGATTGTTCACTCTTGTTGGATCCATTGAAGGGATAGTATCTGCAAAACTAAGCTGA 1278 0.4186 MREEGSGYDSTPFLDTQYGECYVERTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWIGGPLTIIFFASITLLSSFLLTNTYRSPDPELGPHRSSSYLDAVNLHKVCWHDNGNDVTCGFGDGYFMLIFGAVQVLLSQIPNFHNIQWLSILAAFMSFAYAFIGMGLSIQQVRVNGHAEGSIEGIPTSSGIEKVWLIAQALGDIAFSYPFSVILIEIQDTLKSPPPENVTMKRASTISVIITTFFYLFCGCFGYAAFGNDTPGNLLTGFALYTKYWLVDFANACIVIHLVGAYQVYSQPLFANVENWLRFKFPDSEFLNRTYPLKLPLLPVFPLNFLRITFRTAYVASTTVIAMMFPYFNQILGVLAGIIYYPLSIYFPVEMYLSKGNIEAWTAKWVMLRTFSIFGFFLGLFTLVGSIEGIVSAKLS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2327 425 Pfam Transmembrane amino acid transporter protein 25 101 IPR013057 -
Aed4g2327 425 Pfam Transmembrane amino acid transporter protein 114 419 IPR013057 -
Aed4g2327 425 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 106 424 - -
Aed4g2327 425 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 15 105 - -
Aed4g2327 425 PANTHER OS05G0424000 PROTEIN-RELATED 106 424 - -
Aed4g2327 425 PANTHER OS05G0424000 PROTEIN-RELATED 15 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2327 Aed-Chr4 25718947 25726544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2327 23 420 Organic Solute Cotransporters AT5G09220 44.977 3.49e-138 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2327 K24917 - gmx:100801302 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2327 4 25718947 25726544 Aed3g2624 3 28147492 28151482 PCT