Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2624 ATGGAACATGTTTATCGATTTATCACAAGACAAGACAAGCAGCCGCAAAACACAACACGTATCGAAATACGAGTGTCTCGTGGAATTGATTTAATTTGGCTGACTAATCAGCATCTCATCTCATCTGATGATATAGGTATGGCAGCTAAGTCTGAATCAAATGATAACATCCCACTGTTACTCACCCAATCTCTCAAAAGGACAGGGACGTTGTGGAGCGCAGTGGCACACATAGTGACAGGGGTGATAGGATCTGGAGTGCTTTCTCTGCCATGGAGCACTGCACAGCTTGGTTGGGTTGCAGGGCCATTCTCCATCCTTCTAATTGCTTCCACCACTCTCTTCTCTTCTTTTCTTCTATGCAACACTTATCGCCATCCCCATCCTGAATATGGTCCCAAAAGGAGTGCCTCCTACCTTGATGTTGTTCATTTGCATTTAGGTAACTCACCTTTCACTGTCTTCAGATCTCTCAAATCAAATCAAATCAAATATTATGTTTCGCTGGTTACAGGAGTAAGTAATGGACGGCTCAGTGGCCTTCTTGTGAATATAAGTTTGTATGGTTTTGCAATTGCCTTCGTCATTACAACAGCTATCAGCTTAAGAACAATCCAAAATTCATTTTGTTACCACAACAAAGGGCCTGAAGCAGCATGTGAATCAGAATCAGTGGATGCATATTATATGCTGCTTTTTGGGGCTATCCAAATTGTTCTCTCACAGATACCCAACTTCCATGACATCAAATGGCTGTCGGTTGTTGCTGCAATTATGTCCTTTACTTATTCTTTCATAGGATTGGGGCTTTGCGTTGCACAAATCATAGAAAAAGGAGTTGCCGAGGGTAGCATTGGAGGAATCAGTATCTCCAGTGGAACTGAAAAGTTATGGCTGGTTTCTGAAGCCCTTGGTGACATATCATTCTCATTTCCATTCTCAACAATTATTATGGAAATACAGGATACATTGAAATCACCTCCACCAGAAAACCAAACCATGAAGAAAGCCTCAGTAATAGCGATGACTGTCACAACATTCGTGTACCTCACTTGTGGAGGTGCTGGATATGCTGCCTTTGGTGATAATACACCAGGAAACCTTTTAACAGGGTTCGGATCCTCCAAGTCTTATTGGCTTGTTAACGTTGCTAACGCTTGTATAGTGGTTCACCTAGTTGGCTCATATCAGGTGTATAGCCAGCCACTTTTTGCCACTGTTGAGAATTGGTTCCGTTTTAGATTCCCAGATAGTGAATTTGTGAATCACACATATATGTTGAAACTCCCGTTGCTTCCAGCCTATGAACTTAATTTTCTGAGTCTGTCTTTCCGAACTGCTTATGTTGCATCAACAACTGGGATTGCAATGATCTTTCCCTACTTCAATCAGATTTTGGGGGTTCTGGGTAGCATGATTTTTTGGCCGTTGACCATACATTTTCCAGTGGAAATATACTTGAGTCAGTCCAGTACTGTATCATGGACGACTAAGTGGGTTCTGCTTCGGACTTTCAGCGTTTTTGGCTTTTTGTTTGGATTGTTCACTCTCATTGGATGTATTAAAGGAATACTAACTCAAAAAATAAGCTGA 1593 0.4162 MEHVYRFITRQDKQPQNTTRIEIRVSRGIDLIWLTNQHLISSDDIGMAAKSESNDNIPLLLTQSLKRTGTLWSAVAHIVTGVIGSGVLSLPWSTAQLGWVAGPFSILLIASTTLFSSFLLCNTYRHPHPEYGPKRSASYLDVVHLHLGNSPFTVFRSLKSNQIKYYVSLVTGVSNGRLSGLLVNISLYGFAIAFVITTAISLRTIQNSFCYHNKGPEAACESESVDAYYMLLFGAIQIVLSQIPNFHDIKWLSVVAAIMSFTYSFIGLGLCVAQIIEKGVAEGSIGGISISSGTEKLWLVSEALGDISFSFPFSTIIMEIQDTLKSPPPENQTMKKASVIAMTVTTFVYLTCGGAGYAAFGDNTPGNLLTGFGSSKSYWLVNVANACIVVHLVGSYQVYSQPLFATVENWFRFRFPDSEFVNHTYMLKLPLLPAYELNFLSLSFRTAYVASTTGIAMIFPYFNQILGVLGSMIFWPLTIHFPVEIYLSQSSTVSWTTKWVLLRTFSVFGFLFGLFTLIGCIKGILTQKIS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2624 530 Pfam Transmembrane amino acid transporter protein 67 521 IPR013057 -
Aed3g2624 530 PANTHER OS05G0424000 PROTEIN-RELATED 46 149 - -
Aed3g2624 530 PANTHER OS05G0424000 PROTEIN-RELATED 166 529 - -
Aed3g2624 530 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 46 149 - -
Aed3g2624 530 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 166 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2624 Aed-Chr3 28147492 28151482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2624 65 525 Organic Solute Cotransporters AT5G09220 44.612 9.32e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2624 K24917 - gmx:100788056 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2624 3 28147492 28151482 Aed3g2624 3 28147492 28151482 ECH
Aed4g2327 4 25718947 25726544 Aed3g2624 3 28147492 28151482 PCT