Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2115 ATGATGGCTTCTGCAGATCATCAAAGAATTCATCCAGTTCATGATGTTGAGGCACCACACAGACCTTTGGTGCCTGGAAACTATGCTAAATCTGATAAGGGTAGTACTAACATTCCTCAGAGAACTTTTCCAGTGATGCATTCAAAGCCACCAAAGAAAAGAAGAAGCTGTTGCTGCAGGTTCCTGTGTTGGACACTAACAATATTGCTGATTTTGATAATTGCAATTGGCATCACAGTAGGGATACTATACCTTGTGTTTAGGCCAAAGCTTCCAAAATACTCAGTGGACCAACTCAGGATAAGCCAATTCAATGTTTCAGGCAACAACAACAACACACTCTATGCCACATTCAATGTTGCAATCACTGCAAGAAACCCCAACAAGAAGATTGGAATATACTACGAGGGTGGAAGCCACATAAGTGCATGGTACATGGACACAAAACTGTGTGAAGGGTCATTGCCAAAGTTCTACCAGGGTCACAGGAACACAACAGTGCTTGATTTGCCTCTGAGTGGTGAAGCACAGGATGCAAATGGGTTGATGAGTAGGATTCAGGAGCAGGTGCAGCAGAGCAACAATGTTCCGCTGGATCTTAAGGTGAATCAGCCTGTGAGGGTTAAGCTTGGTAAGTTGAAGCTCTTCAAAGTCAAGTTCAGAGTTAGGTGCAGCCTTGTGGTGGATAATCTTATTGGTGCTAGTAATGATATTAGGATTTCCAGTAGTAGATGTAAGTTTAGGCTTAGGCTGTGA 756 0.4299 MMASADHQRIHPVHDVEAPHRPLVPGNYAKSDKGSTNIPQRTFPVMHSKPPKKRRSCCCRFLCWTLTILLILIIAIGITVGILYLVFRPKLPKYSVDQLRISQFNVSGNNNNTLYATFNVAITARNPNKKIGIYYEGGSHISAWYMDTKLCEGSLPKFYQGHRNTTVLDLPLSGEAQDANGLMSRIQEQVQQSNNVPLDLKVNQPVRVKLGKLKLFKVKFRVRCSLVVDNLIGASNDIRISSSRCKFRLRL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2115 251 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 40 249 - -
Aed4g2115 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 40 249 - -
Aed4g2115 251 Pfam Late embryogenesis abundant protein 122 225 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2115 Aed-Chr4 24121400 24122155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2115 52 251 EF-hand Containing Proteins AT5G21130 27.500 8.04e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2115 - - gmx:100789322 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2115 4 24121400 24122155 Aed3g1975 3 23897054 23897818 PCT