Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1953 ATGGCGGTGGAGTATCAGTGTTGTGAAACTCAGTTTTTCATACGGTTGTTGATAATTGCGCTGCTTGTGTTGTTTGCTGGATTGATGTCAGGGCTCACTTTAGGACTCATGTCCTTGAGTCTTGTTGATCTTGAGGTTCTCGCCAAGTCTGGCACCCCTCAGGATCGCAAACATGCCGCGAAGATATTGCCTGTTGTCAGAAATCAACATCTATTACTTTGCACCCTTCTAATTTGTAATGCTGCAGCTATGGAGGCACTTCCTATCTTCCTTGATAGTCTTGTCGTGGCGTGGGGTGCTGTCCTGATTTCAGTTACATTAATTCTTCTGTTTGGTGAGATTATACCTCAATCAATTTGTTCTCGATATGGTTTAGCAATTGGTTCAACAGTGGCTCCAGTTGTCCGTGTTCTTGTATGGATATGTTTTCCTGTTGCTTATCCAATTAGCAAGTTGTTGGACTATTTGCTGGGGCATCGACATGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACACTTGTAAATCTGCATGGCAATGAGGCTGGAAAAGGTGGAGAATTGACACATGATGAAACCACAATCATTGCTGGAGCACTTGAACTCTCTGAGAAGACAGCCAGTGATGCCATGACTCCCATAACTGAAATATTTTCTATTGATATTAATTCAAAGCTTGATAGGGATTTGATGAATGTAATATTGGAGAAAGGGCATAGCAGAGTCCCTGTCTATTACGAGCAGCCTACAAATATTATTGGACTTGTCCTGGTCAAGAATTTATTAACACTTGACCCAGAAGAAGAAGTACACGTGAAAAGTGTGACCATCCGCAGAATTCCAAGGGTTCCAGAAACGTTGCCACTTTATGACATTTTGAATGAATTCCAGAAAGGCCATAGCCACATGGCTGTTGTTGTCAGACATGGTGACAAGACAGGGCAACAGTCTTCCAACAATAATGCCGATGTGAGAGATTTGAAGGTAGATATTGATGGGGAGAAGGAGAAGACTCCCCAAGAGAATATGTTGAAAACCAAGAGGTCACTCCAAAAGTGGAAAAGCTTTCCAAACTCAAATAATAATTCGAATAGGGGTGGTGGGTCTCGGAGCAGAAAATGGTCCAAAAATATGTACTCGGATATTCTGGAAATAGATGGAAATTCACTTCCAAACCTGCCAGAAAAAGAAGAAGCTGTTGGAATCATTACAATGGAAGATGTCATTGAAGAGCTTTTACAAGAGGAGATCTTTGATGAGACGGATCATCAGTTTGAAGACTCATGA 1284 0.419 MAVEYQCCETQFFIRLLIIALLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAAKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVVAWGAVLISVTLILLFGEIIPQSICSRYGLAIGSTVAPVVRVLVWICFPVAYPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPITEIFSIDINSKLDRDLMNVILEKGHSRVPVYYEQPTNIIGLVLVKNLLTLDPEEEVHVKSVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRHGDKTGQQSSNNNADVRDLKVDIDGEKEKTPQENMLKTKRSLQKWKSFPNSNNNSNRGGGSRSRKWSKNMYSDILEIDGNSLPNLPEKEEAVGIITMEDVIEELLQEEIFDETDHQFEDS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1953 427 Gene3D - 381 419 IPR046342 -
Aed4g1953 427 Gene3D - 191 323 IPR046342 -
Aed4g1953 427 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Aed4g1953 427 MobiDBLite consensus disorder prediction 332 372 - -
Aed4g1953 427 ProSiteProfiles CBS domain profile. 210 273 IPR000644 -
Aed4g1953 427 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Aed4g1953 427 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Aed4g1953 427 SUPERFAMILY CBS-domain pair 194 413 IPR046342 -
Aed4g1953 427 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 427 - -
Aed4g1953 427 MobiDBLite consensus disorder prediction 343 372 - -
Aed4g1953 427 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 427 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1953 Aed-Chr4 23229657 23235922 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1953 K16302 - gmx:100795897 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2011 10 24111242 24117623 Aed4g1953 4 23229657 23235922 PCT