Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2011 ATGGCGGTGGAATACACGTGCTGCTCTACGGCGTTCTTCATCCACATAGTGGTGATTGTTCTGCTGGTGCTGTTTGCGGGCCTCATGTCGGGCCTCACCTTGGGCCTCATGTCGCTCAGCCTCGTCGATCTCGAGGTTCTCGCTAAGTCCGGTACTCCTCAGGATCGTAAGCACGCGAAAAAGATATTGCCAGTTGTCAAAAACCAGCATTTATTGCTATGCACTCTGCTCATATGCAATGCTGCAGCCATGGAGACACTCCCTATTTTCCTCGATGGTCTTGTTACTGCGTGGGGCGCTATCCTGATTTCGGTGACTTTAATTCTTTTGTTCGGTGAGATTATACCCCAATCAGTTTGTTCTCGGTATGGTTTGGCTATTGGTGCATCAGTGGCTCCCTTTGTCCGTGTGCTTGTATGCATATGTTTTCCAGTTGCCTTTCCAATTAGCAAGTTGTTGGATTTTTTGCTGGGCCATCGACATGAAGCCCTATTCCGTAGAGCTGAGTTGAAAACACTTGTAAATTTGCATGGTAATGAGGCTGGAAAAGGGGGGGAACTGACACATGATGAAACAACGATCATTGCTGGGGCACTTGAACTCAGTGAGAAGACAGCGAGTGATGCCATGACTTCTATATCTGACACATTTACCATTGATATTAATTCAAAGCTTGATAGGGAACTGATGAATATAATATTGGAGAAAGGGCACAGCAGAGTTCCAGTCTATTATGAACAGCCTACAAACATTATTGGACTTGTACTGGTCAAGAATTTATTGACAGTTCATCCAGAAGATGATGCACCCGTGAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTGAATGAGTTCCAGAAGGGCCATAGCCACATGGCAGTTGTTGTGAGACGGTATGACAAGGAGAATCAACAATCTTCCCAAAATAATGCAAATGAGTCGGTGAGAGATGTTAAGGTGGATATTGATGGTGAAAAGCCTCCCAAAGAGAAAGCTTTGAAACCCAAGATGCCACTCCATAAGTGGAAAAGCTTTCCAAATTCAAACAAGTCACCAAATAGGGGTTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTTTGGAGATAGATGGTAGTCTCCTCCCAAAGCTCCCTGAAGAAGAAGAAGCTGTTGGAGTTATTACCATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACAGATCATCATTTTGAAGACTCATAA 1278 0.4405 MAVEYTCCSTAFFIHIVVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAKKILPVVKNQHLLLCTLLICNAAAMETLPIFLDGLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVAPFVRVLVCICFPVAFPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTSISDTFTIDINSKLDRELMNIILEKGHSRVPVYYEQPTNIIGLVLVKNLLTVHPEDDAPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRYDKENQQSSQNNANESVRDVKVDIDGEKPPKEKALKPKMPLHKWKSFPNSNKSPNRGSRSRKWSKNMYSDILEIDGSLLPKLPEEEEAVGVITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2011 425 MobiDBLite consensus disorder prediction 311 370 - -
Aed10g2011 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Aed10g2011 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Aed10g2011 425 MobiDBLite consensus disorder prediction 311 325 - -
Aed10g2011 425 MobiDBLite consensus disorder prediction 354 370 - -
Aed10g2011 425 MobiDBLite consensus disorder prediction 326 347 - -
Aed10g2011 425 CDD CBS_pair_CorC_HlyC_assoc 205 309 IPR044751 -
Aed10g2011 425 Pfam Cyclin M transmembrane N-terminal domain 18 190 IPR002550 -
Aed10g2011 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Aed10g2011 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Aed10g2011 425 Gene3D - 381 417 IPR046342 -
Aed10g2011 425 Gene3D - 191 325 IPR046342 -
Aed10g2011 425 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2011 Aed-Chr10 24111242 24117623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2011 K16302 - gmx:100801937 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2011 10 24111242 24117623 Aed10g2011 10 24111242 24117623 ECH
Aed10g2011 10 24111242 24117623 Aed4g1953 4 23229657 23235922 PCT