Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1949 ATGGGGTTGTGCAATAGGGTTTCATTTTGTGTATTGTGTGTGTTAGGGTTGGTGATTGTGGGCTACGCTCAAGACTCACCAACAGACTACGTGAATGCACACAACGCAGCAAGGTCAGAGGTGGGTGTTCAAAACTTGGCTTGGGATGATACCGTTGCTGCTTTTGCACAGAGTTATGCTGATCAACGTAAAGGTGATTGCCAACTGATCCATTCTGGTGGTGGTGGCCAATACGGGGAAAATCTCGCAATGAGCACTGCTGACTTTAGTGGCACAAATGCAGTGAAATTATGGGTTGATGAGAAACCTAATTATGACTACAATTCAAACTCGTGTGTTGGTGGGGAGTGCTTGCACTACACTCAGGTGCACTTCAATTCCTGGATTGAAATAAGAGAAAAGTGA 405 0.4519 MGLCNRVSFCVLCVLGLVIVGYAQDSPTDYVNAHNAARSEVGVQNLAWDDTVAAFAQSYADQRKGDCQLIHSGGGGQYGENLAMSTADFSGTNAVKLWVDEKPNYDYNSNSCVGGECLHYTQVHFNSWIEIREK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1949 134 PRINTS Allergen V5/Tpx-1 family signature 117 133 IPR001283 -
Aed4g1949 134 PRINTS Allergen V5/Tpx-1 family signature 46 64 IPR001283 -
Aed4g1949 134 PRINTS Allergen V5/Tpx-1 family signature 94 107 IPR001283 -
Aed4g1949 134 Pfam Cysteine-rich secretory protein family 31 123 IPR014044 -
Aed4g1949 134 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1 127 IPR001283 -
Aed4g1949 134 SMART SCP_3 25 133 IPR014044 -
Aed4g1949 134 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 1 127 - -
Aed4g1949 134 SUPERFAMILY PR-1-like 14 123 IPR035940 -
Aed4g1949 134 Gene3D CAP 25 131 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1949 Aed-Chr4 23212057 23212944 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1949 K13449 - gmx:100805116 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2004 10 24067903 24069739 Aed4g1949 4 23212057 23212944 PCT