Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2004 ATGGAGTCCCCAAACCGAAAGCTTGATTTGATATTATTAATAACCATCATGATCTCAATGTGTAGCAGCATCAACATTTGCATGGCACAAAACCTACCGAAGGATTACCTTGACGCGCACAACCAGGCGCGTGCGGAGGTTGGTGTTCCCCCACTGGCATGGAGCGACACCGTGGCGGCCTTCGCAAGGAAATATGCCAAGACGAGGAGCAAAGACTGCGAAATGGTGAACTCCGAAGGGTCCTACGGGGAGAATCTGGCGGCGGGGTCCGGCGAAGTGAGCGGCGCGGACGCCATGAGGATGTGGCTGGCGGAGAAGAAGGACTATGACCACGAGCAAAACAAGTGTACGAAGGGTGAGTGCGGACATTATACTCAGATAATTTGGAAGAACACAGTTAATCTTGGGTGTGCTAGTGCAAAGTGTGACAATGGCGGGACTGAAGAGAAAGGAAGAAAAGTCGTGAGTTCATACAATTTTAAAAGGCCAAACACACTTGTATTCAACTTTGATGAGGGTGTAGACCTAAGTTTCAGAACCTTCTTCCCCAAATACGAGATTCATCAATTGCATTGTAATCAGAGCTAG 588 0.4864 MESPNRKLDLILLITIMISMCSSINICMAQNLPKDYLDAHNQARAEVGVPPLAWSDTVAAFARKYAKTRSKDCEMVNSEGSYGENLAAGSGEVSGADAMRMWLAEKKDYDHEQNKCTKGECGHYTQIIWKNTVNLGCASAKCDNGGTEEKGRKVVSSYNFKRPNTLVFNFDEGVDLSFRTFFPKYEIHQLHCNQS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2004 195 PANTHER PATHOGENESIS-RELATED PROTEIN 1 24 147 - -
Aed10g2004 195 CDD CAP_PR-1 33 146 - -
Aed10g2004 195 Gene3D CAP 26 174 IPR035940 -
Aed10g2004 195 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 24 147 IPR001283 -
Aed10g2004 195 SMART SCP_3 31 167 IPR014044 -
Aed10g2004 195 ProSitePatterns CRISP family signature 1. 122 132 IPR018244 GO:0005576
Aed10g2004 195 PRINTS Allergen V5/Tpx-1 family signature 98 111 IPR001283 -
Aed10g2004 195 PRINTS Allergen V5/Tpx-1 family signature 52 70 IPR001283 -
Aed10g2004 195 PRINTS Allergen V5/Tpx-1 family signature 121 137 IPR001283 -
Aed10g2004 195 Pfam Cysteine-rich secretory protein family 37 147 IPR014044 -
Aed10g2004 195 PRINTS Venom allergen 5 signature 120 139 IPR002413 -
Aed10g2004 195 PRINTS Venom allergen 5 signature 52 70 IPR002413 -
Aed10g2004 195 SUPERFAMILY PR-1-like 13 159 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2004 Aed-Chr10 24067903 24069739 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2004 K13449 - gmx:100802988 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2004 10 24067903 24069739 Aed10g2004 10 24067903 24069739 ECH
Aed10g2004 10 24067903 24069739 Aed4g1949 4 23212057 23212944 PCT