Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1919 ATGCACCCACACACCATCCATCACATTAATTTCACAGTCACACCCACAAAAACAAAACTTACCTTCTCCTTTTATACTCTCATCACTGCCACTCTCACCCCAACAGATAATAATACTATGGCAGCAATCTCCTTTTATGTGTTTCTCTTCTCTTTCATCTTCTTCTACAATTTGTTTTCTTTCGCAGCAGCTAGTTCTAATAAGATTAGGATCACGCGGGATGTCATGATCAGGGACAAAGAGAACGAGACATTGGTGTCAGAAGAGCTCAACTTCGTGATGGGTTTCTTCAGTTTGGACAAAGACAACTCCTCTAATTCCCGCTACGTTGGTATTTGGTACCACAACATTCCCGGACCAGCAGTTATATGGGTTGCAAACCGCGACAAACCCATCAACGGCACCGGAGGAGCCGTCACTATTGCAAATGACGGCAACCTTGTAGTCTTCGATGGAGCCATGAACCATGTCTGGTCCACCAACGTTTCCATTGATAGCAACGACAAAAACTCCTCAGCATCGCTCCGTGACGATGGTAACCTCGTCCTCTCAAGCGAAAAGAAAGAGGTTTGGCAAAGCTTCGAGAATCCAACGGATACATACATGCCCGGTATGAAGGTTCCAGTGGGTGGGTTGAGCACTAGCTATGTCTTCACTTCGTGGAAATCATCGACGGATCCTTCGAAGGGAAACTACACTATGGGGGTGGATCCTGAAGGGTTGCCTCAGATAGTGGTTTGGGAGGGGGAAAAGAGAAGGTGGAGAAGTGGGTATTGGGATGGTAGAATGTTTCAAGGGTTGTCTATCACAGGAAGTTATCTCTACGGTTTTACGCTTAATGGGGATGGTAAAGGTGGTAGGTATTTCATATATAACCCGTTAAACGGCACTGATAAGGTGAGGTTTCAAATGGGGTGGGATGGATACGAGAGAGAGTTCAGGTGGAATGAAGATGACAAACGTTGGACTGAGATTCAAAAAGGGCCTTTTCATGACTGTGATATTTATAACAAGTGTGGGACTTTCGCGGCGTGTGAGGTGTCAGCTTCGGGTGGTTTACCTGTTTGTACTTGCATACGAGGTTTTGAACCCAAGCATAGAGATCAGTGGAATCACGGGAACTGGTCGGGTGGGTGTACGAGGTTGACACCACTCAAGGCTCAGAGGAATAATGTTACTTCTGGGACTGAGGTTAGTGTTGGAGAGGATGGGTTTTTGGATCGTAGGTCTATGAAGTTGCCCGATTTTGCACGTGTGGTTGGCACGAATGATTGTGAGAAAGAGTGTTTGAACAACGACTCTTGTACGGCATATGCCAATGTTAATGGAATAGGGTGCATGGTGTGGCACGGGGACTTAGTTGATATTCAACATTTGGGAAGTGGAGGAAATACATTAAGCATTCGTCTCGCTGATTCTGATTTAGATGATGCAGGAAAAAAGAACAAGACTGTGATAATATCAACTGTTGTGGCGGGGTTAATCTGCCTAGGAATCTTTTGCTGCCTACATTTTCCTCAGTTTCTTGTTGCAAGAGTAGTGATGTACTACCAGTTTTTGATGCAAACAAGAGCAGAGAAATGTCAGCAGAATTTTCAGGATCACCCGACCTTAGTTTAG 1620 0.4512 MHPHTIHHINFTVTPTKTKLTFSFYTLITATLTPTDNNTMAAISFYVFLFSFIFFYNLFSFAAASSNKIRITRDVMIRDKENETLVSEELNFVMGFFSLDKDNSSNSRYVGIWYHNIPGPAVIWVANRDKPINGTGGAVTIANDGNLVVFDGAMNHVWSTNVSIDSNDKNSSASLRDDGNLVLSSEKKEVWQSFENPTDTYMPGMKVPVGGLSTSYVFTSWKSSTDPSKGNYTMGVDPEGLPQIVVWEGEKRRWRSGYWDGRMFQGLSITGSYLYGFTLNGDGKGGRYFIYNPLNGTDKVRFQMGWDGYEREFRWNEDDKRWTEIQKGPFHDCDIYNKCGTFAACEVSASGGLPVCTCIRGFEPKHRDQWNHGNWSGGCTRLTPLKAQRNNVTSGTEVSVGEDGFLDRRSMKLPDFARVVGTNDCEKECLNNDSCTAYANVNGIGCMVWHGDLVDIQHLGSGGNTLSIRLADSDLDDAGKKNKTVIISTVVAGLICLGIFCCLHFPQFLVARVVMYYQFLMQTRAEKCQQNFQDHPTLV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1919 539 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 43 503 - -
Aed4g1919 539 Pfam D-mannose binding lectin 122 222 IPR001480 -
Aed4g1919 539 CDD PAN_AP_plant 402 471 - -
Aed4g1919 539 CDD B_lectin 82 197 IPR001480 -
Aed4g1919 539 Pfam S-locus glycoprotein domain 254 365 IPR000858 GO:0048544
Aed4g1919 539 ProSiteProfiles Bulb-type lectin domain profile. 76 196 IPR001480 -
Aed4g1919 539 Gene3D - 81 262 - -
Aed4g1919 539 ProSiteProfiles PAN/Apple domain profile. 400 471 IPR003609 -
Aed4g1919 539 SUPERFAMILY alpha-D-mannose-specific plant lectins 121 261 IPR036426 -
Aed4g1919 539 SMART blect_4 76 197 IPR001480 -
Aed4g1919 539 SMART ntp_6 400 470 IPR003609 -
Aed4g1919 539 Pfam PAN-like domain 401 456 IPR003609 -
Aed4g1919 539 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 43 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1919 Aed-Chr4 23077799 23082047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1919 - - gmx:102660295 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1975 10 23917496 23922753 Aed4g1919 4 23077799 23082047 PCT