Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1975 ATGACCACCATACGCATTAAACATGCAAAATTTCTGCTTTTTTCGTTCTTTCTCTTCTGTTTTCATATTTTGTTCTCTCATGCAGCCAATTCTATCACACAAGATGAGAAAACAATAATCAGAGATGACGACGGTGGTAACAACTTGGTGTCGGAAGATCTCACCTTTGAAATGGGTTTCTTCGGTTTTGATAACTCTTCAAGATACGTAGGAATTTGGTACCACGAGATTCCGAATAAAACATTCATATGGGTTGCAAACAGAGAGAGACCCATCAAAGGAAGAGAAGGTTTGATCCAAATCAAAAGTGACGGCAACTTGGTTGTCCTCGATGGAGAGAGCAACGAGGTGTGGTCAACTAACACGTCATCAACTCCAAAGAACAACACAAACGCTGTTCTCCACAACGATGGGAACCTCGTTCTTTCAGAAAACGACAGTGATGTGTGGAAAAGCTTCGAGGATCCGGTTGATACATTCGTGCCAGGTATGATACTGCCAGCAAGTGCCGGAGCAAGCATATTCACGTCGTGGAAATCAGCAACGGATCCTTCACCGGGAAACTACTCGATGAAGGTTGACTCTGAGGGGTCAACGCTGCAGATTTTGATTTTGGATGGTGAAAAGAGAAGGTGGAGAACTGGGTATTGGGATGGTAGAGCTTTCACTGGTGTGTCCGATGTGACAGGAAGCTCTCTATTTGGTTTTGGACTCAACGACGGCAATAACGGGACGCAGCACTTTACATACAAATGGAACAGCCCTGACAAGATGAGGTTTCAGATAACATGGGACGGGTTTGAGAAGAAGTTCGTGTGGAATGAGGAAGAGAAACGGTGGAATGTGACACAATTTGAGCCTGCTCATGAGTGTGAGCATTACAATTTCTGTGGAAGCTATGCAGTGTGTGATAGGGATGAGTCTCCTGTTGTTTGTAGCTGCATTCACGGGTTTGAACCGAGGCATTTGGATGAGTGGAATAACAGGAATTGGTCAAGTGGGTGTGGAAGGAGGACTCTACTGAAGGCTGAGGCTGAAAGAGCTAATAATAGTTCTTCTGGAACTGTGGTTAGTGTTGGAGAAGATGGTTTCTTGGAGCAAAGGTGTACCAGGTTGCCGGATTTTGCACGTTTGGAGAGTTATTTTAATGATGGGGATTGTAAGAGCTATTGTCTGCAGAATAGTTCTTGTACTGCTTATTCATATACTTTTGGAATTGGGTGCATGATTTGGTATCGGGAGTTACTTGATATTCAACACACTCAAAGTAATCTTGGAAGTGTATTGCATATCCGTCTTGCTGATGCTGATTTAGGCGATGGGGAGAAAAAGACCAAAATTTGGATAATATTAGCTGTTGTGGGGGGGTTGATCTGCATTGGAATCTTTGCATTGCTGGTATGGAGATTTAAGAGAAAACCTAAAGTTTCCTCAGCTTCAGCTGGTTACAACAACAATAGCGAAATGCCAGTCTTTGATCTAACGAGGAGTACAGACTTATCAGAAATTTCAGGGGAGTTAGGCCTGGCACCTATGGAGTGA 1542 0.4351 MTTIRIKHAKFLLFSFFLFCFHILFSHAANSITQDEKTIIRDDDGGNNLVSEDLTFEMGFFGFDNSSRYVGIWYHEIPNKTFIWVANRERPIKGREGLIQIKSDGNLVVLDGESNEVWSTNTSSTPKNNTNAVLHNDGNLVLSENDSDVWKSFEDPVDTFVPGMILPASAGASIFTSWKSATDPSPGNYSMKVDSEGSTLQILILDGEKRRWRTGYWDGRAFTGVSDVTGSSLFGFGLNDGNNGTQHFTYKWNSPDKMRFQITWDGFEKKFVWNEEEKRWNVTQFEPAHECEHYNFCGSYAVCDRDESPVVCSCIHGFEPRHLDEWNNRNWSSGCGRRTLLKAEAERANNSSSGTVVSVGEDGFLEQRCTRLPDFARLESYFNDGDCKSYCLQNSSCTAYSYTFGIGCMIWYRELLDIQHTQSNLGSVLHIRLADADLGDGEKKTKIWIILAVVGGLICIGIFALLVWRFKRKPKVSSASAGYNNNSEMPVFDLTRSTDLSEISGELGLAPME 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1975 513 CDD PAN_AP_plant 361 434 - -
Aed10g1975 513 Pfam PAN-like domain 360 418 IPR003609 -
Aed10g1975 513 SMART ntp_6 359 433 IPR003609 -
Aed10g1975 513 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 2 509 - -
Aed10g1975 513 ProSiteProfiles Bulb-type lectin domain profile. 34 155 IPR001480 -
Aed10g1975 513 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 509 - -
Aed10g1975 513 SMART blect_4 40 156 IPR001480 -
Aed10g1975 513 CDD B_lectin 45 156 IPR001480 -
Aed10g1975 513 ProSiteProfiles PAN/Apple domain profile. 359 434 IPR003609 -
Aed10g1975 513 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Aed10g1975 513 Pfam D-mannose binding lectin 81 179 IPR001480 -
Aed10g1975 513 Gene3D - 36 153 IPR036426 -
Aed10g1975 513 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 184 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1975 Aed-Chr10 23917496 23922753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1975 - - gmx:100786721 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1975 10 23917496 23922753 Aed10g1975 10 23917496 23922753 ECH
Aed10g1975 10 23917496 23922753 Aed4g1919 4 23077799 23082047 PCT