Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1773 ATGTCTTCCTTTTCCAGTCTCCGGAGATTGTCACTGTTGAATCAACGCTCTCGTACCCTCCACTCCTCCTCTTCTTCCAACCCACAACACAATCCTAAGTGCCATTGGGGTTCAGGTTCAGCCATTGTTGTAGCCTCTTCTGCTCTTGCCCTTATCTATTGCTTCACCACACACAATTCAAACAATTCCCCTCGCAGCTCTTCACTGTTTGAAAAATCATCCCTTCCGGAAAATGCGTACAGAAGCAAGGTTTTCTTCAACTATGAGAAGCGCCTACGGTTGCATAGTCCACCCGAAAAGGTAAGGAGAACTACTGATGAAGCCAGTGGACCTAATGCGAGCAGTTGTTCCTGTTTTCCCTCCATCAGAATCCAACCTTGTAAGAGAGGGATACTTGAAAGGTATATCTTTTTTGTAACTCTGCTTAGCATCCAAGAATCAAGCTTTTCTGCAGCATTTAAAATGTTTGACAAGGATAATGACGGGGAGATAGATAAGGAAGAATTCAAGAAAGTGATGCAATCAATGCGATCTCATACCAGACAAGGTATTCAACACAGGGATGGAAGACGAACTGGCCTAAAGGCCAATGCTTTTATAGAAAATGGTGGGTTGGTGGAATACTTATTTGGTAAAGATGGAAAGGGACGCCTCAAACATGATAAATTCGTGCAGTTCATAAGAGACTTGCATGATGAAATTGTGAGGCTGGAGTTTGCTCATTATGATTACAAATCTCGAAAAACTATAACGGCCAAGGACTTTGCACACTCCATTGTTGCTTCCGCTGAGTTGAGTCATCTGGCCAGGTTGCTTGAACGGGTTAATGAATTGAGCAACTATCCACGGTTTAAGGATGTACGCATAACATTTGAGGAGTTCAAAAATTTTGCAGAGCTGCGGAAAAAACTATTACCATTTTCATTGGCCATTTTCAGTTTTGCAGAAGTACAAGGCCTGTTAACAAGAGATGATTTTCAGCGAGCTGCATCACATGTATGTGGCTTATCTCTCTCAGATAATGTGGTTGAGATTGTTTTCCATTTGTTTGACGCAAACGATGATGGAAATCTGAGTACGGAGGAGTTTGTTAATGTGCTACTACATCGAGAAAAAGACATTGCTCAACCCGTGGAGACAGGAATCATGGGTTTCTTGTCATGCTGCTGGAAATGTACGGACTCCTCTGCATCTTCTCGGTTGTTTTCCTGA 1212 0.4266 MSSFSSLRRLSLLNQRSRTLHSSSSSNPQHNPKCHWGSGSAIVVASSALALIYCFTTHNSNNSPRSSSLFEKSSLPENAYRSKVFFNYEKRLRLHSPPEKVRRTTDEASGPNASSCSCFPSIRIQPCKRGILERYIFFVTLLSIQESSFSAAFKMFDKDNDGEIDKEEFKKVMQSMRSHTRQGIQHRDGRRTGLKANAFIENGGLVEYLFGKDGKGRLKHDKFVQFIRDLHDEIVRLEFAHYDYKSRKTITAKDFAHSIVASAELSHLARLLERVNELSNYPRFKDVRITFEEFKNFAELRKKLLPFSLAIFSFAEVQGLLTRDDFQRAASHVCGLSLSDNVVEIVFHLFDANDDGNLSTEEFVNVLLHREKDIAQPVETGIMGFLSCCWKCTDSSASSRLFS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1773 403 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 102 IPR039800 GO:0005509|GO:0006851
Aed4g1773 403 PANTHER CALCIUM-BINDING EF HAND PROTEIN 1 102 - -
Aed4g1773 403 Pfam EF-hand domain pair 319 370 IPR002048 GO:0005509
Aed4g1773 403 SMART efh_1 148 176 IPR002048 GO:0005509
Aed4g1773 403 SMART efh_1 342 370 IPR002048 GO:0005509
Aed4g1773 403 SUPERFAMILY EF-hand 146 371 IPR011992 -
Aed4g1773 403 CDD EFh_MICU 149 367 - -
Aed4g1773 403 Pfam EF hand 150 176 IPR002048 GO:0005509
Aed4g1773 403 Gene3D - 316 382 - -
Aed4g1773 403 ProSitePatterns EF-hand calcium-binding domain. 351 363 IPR018247 -
Aed4g1773 403 ProSiteProfiles EF-hand calcium-binding domain profile. 144 179 IPR002048 GO:0005509
Aed4g1773 403 Gene3D - 142 181 - -
Aed4g1773 403 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 133 403 IPR039800 GO:0005509|GO:0006851
Aed4g1773 403 PANTHER CALCIUM-BINDING EF HAND PROTEIN 133 403 - -
Aed4g1773 403 ProSiteProfiles EF-hand calcium-binding domain profile. 338 373 IPR002048 GO:0005509
Aed4g1773 403 ProSitePatterns EF-hand calcium-binding domain. 157 169 IPR018247 -
Aed4g1773 403 Gene3D - 195 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1773 Aed-Chr4 22034035 22036400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1773 64 335 EF-hand Containing Proteins AT4G32060 50.779 1.62e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1773 K22827 - gmx:100786375 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1171 6 16451366 16454807 Aed4g1773 4 22034035 22036400 PCT