Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1632 ATGGCTCTTCTGAGTCGAGCCTCTTCACGCTTCCCTCAACTGGTTTCTTCTCAAAGTCAAAGGGTAGTTTCCCTCCACACAACGCTCCCATCTCTGAACGCATCCGCACCCACGCCCACTCCATATGCTCCGCCGCCGCCCCCTTCCGCTTCATCTCCCGCCGGCGTGTCCAAGACGGCGGAGTTCGTGATCTCGAAGGTGGACGATCTGATGAATTGGGCCCGCCGCGGCTCCCTCTGGCCCATGACCTTCGGCCTCGCCTGCTGCGCCGTCGAAATGATGCACACCGGCGCTGCCCGCTACGATCTCGATCGCTTCGGCATCATTTTCAGGCCCAGCCCTCGCCAGTCTGATTGTATGATTGTCGCCGGCACTCTCACCAATAAGATGGCCCCTGCTCTTCGCAAGGTTTATGACCAAATGCCTGAGCCTAGATGGGTCATCTCAATGGGAAGTTGTGCTAATGGAGGAGGATACTACCATTACTCTTACTCCGTAGTTCGTGGATGTGACAGGATTGTTCCTGTTGACATATATGTTCCAGGGTGTCCTCCAACTGCTGAGGCTTTGCTGTATGGACTCCTCCAGCTGCAGAAAAAGATCAATAGGCGCAAAGACTTCCTCCATTGGTGGACAAAGTGA 642 0.553 MALLSRASSRFPQLVSSQSQRVVSLHTTLPSLNASAPTPTPYAPPPPPSASSPAGVSKTAEFVISKVDDLMNWARRGSLWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1632 213 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 88 197 IPR006137 GO:0051536
Aed4g1632 213 TIGRFAM nuoB_fam: NADH-quinone oxidoreductase, B subunit 62 203 IPR006138 GO:0008137|GO:0048038|GO:0051539
Aed4g1632 213 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL 1 213 - -
Aed4g1632 213 SUPERFAMILY HydA/Nqo6-like 61 205 - -
Aed4g1632 213 MobiDBLite consensus disorder prediction 37 52 - -
Aed4g1632 213 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 54 202 IPR006138 GO:0008137|GO:0048038|GO:0051539
Aed4g1632 213 PANTHER NADH DEHYDROGENASE 1 213 - -
Aed4g1632 213 MobiDBLite consensus disorder prediction 33 55 - -
Aed4g1632 213 Gene3D - 59 213 - -
Aed4g1632 213 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 169 185 IPR006138 GO:0008137|GO:0048038|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1632 Aed-Chr4 21021105 21023748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1632 K03940 - gmx:100802267 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1632 4 21021105 21023748 Aed4g1632 4 21021105 21023748 ECH
Aed6g0447 6 3915157 3918503 Aed4g1632 4 21021105 21023748 PCT