Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1211 ATGATGATGTCTCTGTTTGGTGCTTATTCCTTCTGTGAAGTTGGAAAGGATGCAGCTGGAGTTGCTGGGAACATCTTTGCTTTTGGGTTGTTTGTATCCCCCATACCCACATTTAGGAGAATTCTCAGAAATGGGTCAACAGAAATGTTCTCAGGGTTGCCATATATCTATTCTCTATTGAACTGCTTGATCTGCTTGTGGTACGGCACACCTCTTGTATCACATGATAATCTGTTGGTGACAACTGTTAATTCAATTGGAGCAGCCTTTCAGCTTGTGAGGATACTTGGATTACTGCTAGCAGTTTTGGGCATATTTGTGATCATACTATTTGGGAGCTTGCAAATTGGTGACAGTGCAACGCGCCGGATGTTTGTTGGATTCTTGAGTTGTGCTTCTCTGATTTCAATGTTTGCATCTCCATTGTTTGTAATTAAATTGGTCATCCGGACAAAAAGTGTTGAGTTTATGCCCTTTTATCTTTCTCTTTCCACCTTCCTGATGAGCATCTCCTTCTTTCTCTATGGATTGCTCAGTGATGATGCCTTCATTTATGTACCAAATGGGATAGGAACTGGTTTAGGAATGATACAATTGGTATTATATTTCTACTATAAAGGTTCATCCAGTGAAGACTGCAGAGAACCCTTGATAGTGTCGTGTGAATGA 669 0.4051 MMMSLFGAYSFCEVGKDAAGVAGNIFAFGLFVSPIPTFRRILRNGSTEMFSGLPYIYSLLNCLICLWYGTPLVSHDNLLVTTVNSIGAAFQLVRILGLLLAVLGIFVIILFGSLQIGDSATRRMFVGFLSCASLISMFASPLFVIKLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLLSDDAFIYVPNGIGTGLGMIQLVLYFYYKGSSSEDCREPLIVSCE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1211 222 PANTHER RAG1-ACTIVATING PROTEIN 1 13 221 - -
Aed4g1211 222 Gene3D - 123 208 - -
Aed4g1211 222 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 13 221 - -
Aed4g1211 222 Pfam Sugar efflux transporter for intercellular exchange 20 96 IPR004316 GO:0016021
Aed4g1211 222 Pfam Sugar efflux transporter for intercellular exchange 125 207 IPR004316 GO:0016021
Aed4g1211 222 Gene3D - 20 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1211 Aed-Chr4 12060330 12063636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1211 3 220 Miscellaneous Gene Families AT3G14770 64.103 4.76e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1211 K15382 - gmx:100790469 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0464 1 6374688 6381565 Aed4g1211 4 12060330 12063636 ECH
Aed4g1211 4 12060330 12063636 Aed4g1211 4 12060330 12063636 ECH