Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0229 ATGGCAGGAGCACTGACAGATGATCAGATTGCTGAATTCCATGAAGCCTTTTGCCTCATTGATAAGGACTCTGATGGATTCGTTACTGTGGATGAATTGGCAACCATTATCCGATCATTAGATGGGAATCCAACGAAAGATGAAATCCAAGACATGATTAGTGAGGTCGATGTTGATGGGAATGGGAGTATAGATTTTGAAGAGTTCTTGAATATTATGGGAAGAAAAATGAAGGAAACTTTATCTGAAGAGCTGAAAGAAGCATTCAAACTGAGGCACGTAATGATGAACTTGGGAGAGAGGCTGACAGATGAAGAGGCAGAACAGATGATTAGAGAGGCAGATTTGGATGGGGATGGTCAAGTTAGCTTTGAAGAATTTGCAAGGATTATGATGCTCAAATGA 405 0.4049 MAGALTDDQIAEFHEAFCLIDKDSDGFVTVDELATIIRSLDGNPTKDEIQDMISEVDVDGNGSIDFEEFLNIMGRKMKETLSEELKEAFKLRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFEEFARIMMLK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0229 134 ProSitePatterns EF-hand calcium-binding domain. 115 127 IPR018247 -
Aed4g0229 134 PANTHER CALMODULIN-LIKE PROTEIN 9 1 132 - -
Aed4g0229 134 Gene3D - 51 94 - -
Aed4g0229 134 PANTHER CALCIUM BINDING PROTEIN 1 132 - -
Aed4g0229 134 CDD EFh 48 132 IPR002048 GO:0005509
Aed4g0229 134 ProSiteProfiles EF-hand calcium-binding domain profile. 102 134 IPR002048 GO:0005509
Aed4g0229 134 Pfam EF-hand domain pair 91 128 IPR002048 GO:0005509
Aed4g0229 134 Pfam EF-hand domain pair 12 73 IPR002048 GO:0005509
Aed4g0229 134 SUPERFAMILY EF-hand 4 132 IPR011992 -
Aed4g0229 134 CDD EFh 12 73 IPR002048 GO:0005509
Aed4g0229 134 ProSiteProfiles EF-hand calcium-binding domain profile. 8 43 IPR002048 GO:0005509
Aed4g0229 134 Gene3D - 2 50 - -
Aed4g0229 134 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Aed4g0229 134 SMART efh_1 48 76 IPR002048 GO:0005509
Aed4g0229 134 SMART efh_1 106 134 IPR002048 GO:0005509
Aed4g0229 134 SMART efh_1 12 40 IPR002048 GO:0005509
Aed4g0229 134 Gene3D - 95 132 - -
Aed4g0229 134 ProSitePatterns EF-hand calcium-binding domain. 21 33 IPR018247 -
Aed4g0229 134 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0229 Aed-Chr4 1646847 1648093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0229 1 134 EF-hand Containing Proteins AT3G56800 61.745 1.64e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0229 K02183 K13448 gmx:100527005 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0229 4 1646847 1648093 Aed8g0859 8 7316966 7317572 PCT