Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0205 ATGGCAGAGGAAGGTTTTGATGGACATGATATAGGATACGTGCCTGAGGACCCTAATTTTCCTCAGAATCATTCTGATGAGCATGATGTAGGGACAGTGATTGATAGCTCTGGATTTCCTCACCTGCTACCTGATGAAGATGATGATACAGGTCATTTGGAGGAGGATGCCAATTTTCCTGAAAATGATTTTGATGGACAGGAACATGAACATGATGTTGAAGGTGTGCCGGTGGACGTGGATTCTCCACAGGAGGAGCATGTTGAGGAAGGTCTTGATGGTGCTGAAGATGTGCCTGAGAATTTCGATTCTCCGTCAAAACAGGGGTCCGAGATTGATTCGAAAGGAAATGAAATTAAGAAGTGGCCAGGGTGGCCTGGAGAGAATGTCTTCAGGATGTTGGTTCCAGTGCAAAAGGTTGGCAGTATTATTGGCCGAAAGGGCGAGTTTATAAAGAAAATGACAGAAGAAACTAAGGCGCGAATTAAGATTCTGGATGGTCCACCTGGAATCTCAGAAAGAGCAGTAATGGTTTCTGCAAAAGAAGAGCCAGATCGTGCCATACCACCTGCTGTTGATGGCTTGTTAAGGGTTCATAAGCAAGTTATGAATGTTGACCGTGATCCTGCAGATAGTGCATCGGCTGCTGGGCGATCAATTGTCACTAGGCTTCTAGTGGCAGATACTCAAGCAGGAAGCTTAATAGGAAAGCAGGGATCAACCATAAAATCCATTCAAGATGGCTCTGGTTGCACTATACGTGTTCTTGGATCAGATAACCTACCAGTATTTGCTTTGCGAGATGATAGTATTGTTGAAGTACAAGGGGAATCTGCTGGTGTTCACAAGGCAGTTGAACTTATTGCAGTTCATTTACGCAAGTTCTTGGTTGACCGCAGCATAGTTGGAATGCAAATGCAAGATGTTAGAGTTAACCAGAATGTGCCACCACATCAAAATTGGGGTCCTCCTCCTCAAGGGTTTCCTGCTCCTGCTGGTGGTGGTGGTGGAGGACCTGCTTTTGCCCCTAATCATCAATATATGCCGCCACCTTCACATCACTATGATAGTTATTATCCACCTACTGAGTTGCCTCCCATGGACAAACACCTTCATCAAGGTCCACCACCTGCCTATGCAAGGGATGCTTCTATGGGAATTCATTCATCAAGTGCACAGCCACAACAATCTGTTGTAACTAAGGTCACACAGCACATGCAAATTCCTCTTTCATACGCAGATGCTGTTATAGGAGCATCAGGCTCAAATATCAGCTATATACGTCGTGCTAGTGGAGCAAGCATTACAATTCAGGAAACAAGGGGTGTGCCTGGGGAGATGACTGTTGAGATAAGTGGGACTTCTTCTCAAATACAGGCAGCCCAGCAGCTGGTTCAGAATTTCATGGCGGAAGCTGCTGCAAGTGCAGCGGCACAAGATCCTATGGGGGGATCAGTTAGCCAAGGATATGGTGCCTATCCAACAAATGCTCCAGTTTATGCATCTCCACCCGCAGGCGCTGGTGGTCATACAGGCCATGCGCCTTCTGCAGATTATGGCCCCGTATATGGTACCAATTATGGGTATTAA 1590 0.4616 MAEEGFDGHDIGYVPEDPNFPQNHSDEHDVGTVIDSSGFPHLLPDEDDDTGHLEEDANFPENDFDGQEHEHDVEGVPVDVDSPQEEHVEEGLDGAEDVPENFDSPSKQGSEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKMTEETKARIKILDGPPGISERAVMVSAKEEPDRAIPPAVDGLLRVHKQVMNVDRDPADSASAAGRSIVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSDNLPVFALRDDSIVEVQGESAGVHKAVELIAVHLRKFLVDRSIVGMQMQDVRVNQNVPPHQNWGPPPQGFPAPAGGGGGGPAFAPNHQYMPPPSHHYDSYYPPTELPPMDKHLHQGPPPAYARDASMGIHSSSAQPQQSVVTKVTQHMQIPLSYADAVIGASGSNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAAASAAAQDPMGGSVSQGYGAYPTNAPVYASPPAGAGGHTGHAPSADYGPVYGTNYGY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0205 529 Gene3D - 128 297 - -
Aed4g0205 529 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 54 523 - -
Aed4g0205 529 ProSiteProfiles Type-1 KH domain profile. 219 288 - -
Aed4g0205 529 Pfam KH domain 403 466 IPR004088 GO:0003723
Aed4g0205 529 Pfam KH domain 131 183 IPR004088 GO:0003723
Aed4g0205 529 Pfam KH domain 222 288 IPR004088 GO:0003723
Aed4g0205 529 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 392 472 IPR036612 GO:0003723
Aed4g0205 529 CDD PCBP_like_KH 221 289 - -
Aed4g0205 529 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 215 302 IPR036612 GO:0003723
Aed4g0205 529 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 120 183 IPR036612 GO:0003723
Aed4g0205 529 CDD KH-I 403 466 - -
Aed4g0205 529 MobiDBLite consensus disorder prediction 55 89 - -
Aed4g0205 529 Gene3D K Homology domain, type 1 388 477 IPR036612 GO:0003723
Aed4g0205 529 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 54 523 - -
Aed4g0205 529 SMART kh_6 400 470 IPR004087 GO:0003676
Aed4g0205 529 SMART kh_6 127 200 IPR004087 GO:0003676
Aed4g0205 529 SMART kh_6 218 293 IPR004087 GO:0003676
Aed4g0205 529 CDD PCBP_like_KH 130 199 - -
Aed4g0205 529 ProSiteProfiles Type-1 KH domain profile. 401 465 - -
Aed4g0205 529 MobiDBLite consensus disorder prediction 1 118 - -
Aed4g0205 529 ProSiteProfiles Type-1 KH domain profile. 128 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0205 Aed-Chr4 1503634 1510528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0205 K21444 - gmx:100799901 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0205 4 1503634 1510528 Aed8g0888 8 7631498 7636822 PCT