Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0164 ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCTGACAACACCTGCAATCACCTCATGAGCAATAGCAGCAGCACCACCAACAACCTAATAATTGCCGGTAGTGCCACCTCTTCCTCTCCTGCTAATAATTCCACCTCCATCACCAGCAGCAGCCGCTACGAGAACCAGAAGCGCCGTGACTGGAACACCTTCGGTCAATACCTCAAGAACCACCGTCCTCCTCTCTCCCTCTCCAGGTGCAGCGGTGCACACGTCCTTGAGTTTCTAAGGTACCTGGATCAATTTGGGAAGACCAAGGTGCACACACCGATCTGTCCCTTCTATGGGCACCCGAATCCTCCGGCGCCATGTCCATGTCCTCTAAGGCAAGCTTGGGGGAGCCTGGACGCACTGATAGGGCGTTTGCGTGCAGCTTTTGAGGAAAATGGAGGGAAGCCAGAAGCAAATCCTTTTGGAGCACGAGCTGTGAGACTCTACCTTCGTGAGGTTCGTGATCTGCAGTCCAAAGCCAGAGGAATTAGCTACGAGAAGAAGAAAAGGAAGCGTCCACCACCTCAGCAACAACCCATGCCAATACCCCATCACCCTCTCCCTCCTCCAGGTGCAAGTGCAACTCATCATCATTAG 636 0.5189 MDSNIQDFIDTCNSDNTCNHLMSNSSSTTNNLIIAGSATSSSPANNSTSITSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQPMPIPHHPLPPPGASATHHH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0164 211 MobiDBLite consensus disorder prediction 37 55 - -
Aed4g0164 211 Pfam ALOG domain 50 168 IPR006936 -
Aed4g0164 211 ProSiteProfiles ALOG domain profile. 55 182 IPR006936 -
Aed4g0164 211 PANTHER PROTEIN G1-LIKE2 1 204 IPR040222 -
Aed4g0164 211 MobiDBLite consensus disorder prediction 188 203 - -
Aed4g0164 211 MobiDBLite consensus disorder prediction 173 211 - -
Aed4g0164 211 MobiDBLite consensus disorder prediction 37 58 - -
Aed4g0164 211 PANTHER G1-LIKE PROTEIN 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0164 Aed-Chr4 1211393 1215386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0164 - - gmx:100527164 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0164 4 1211393 1215386 Aed8g1873 8 23423007 23423531 ECH
Aed4g0164 4 1211393 1215386 Aed4g0164 4 1211393 1215386 ECH
Aed8g0935 8 8089724 8092050 Aed4g0164 4 1211393 1215386 ECH
Aed1g2729 1 22595027 22596496 Aed4g0164 4 1211393 1215386 ECH
Aed4g0164 4 1211393 1215386 Aed8g0192 8 1662439 1663020 PCT
Aed8g0935 8 8089724 8092050 Aed4g0164 4 1211393 1215386 PCT