Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2602 AAAAGACACGCATATTACATCGTTAATGTTCCATATGTATTCTTAGCATGCTGGAAGATTGTAAAGCCTCTTTTGCAACAAAGTACAAGGAGGAAAGTCCACGTTTTGAAAGGTTATGGCATACAGGAATTACTGAAGGTAATGGACTATGCATCCCTCCCACATTTTTGCAGAAAGGAGGATTCCAGGGTACCCCGACAACTCTATAATTACATCAAGCAGCAAGCTATATTCATATCATCAATCAGACAGGAATCTTTCCATGTATATTTGCCAGAGCCAGACCCAGATGATGCCAAAATTGCTAAGACTATAGAAACTGAGTTCCACAAACTGGAAAGTCAGAATGGCCTTACCAACTGA 363 0.3994 KRHAYYIVNVPYVFLACWKIVKPLLQQSTRRKVHVLKGYGIQELLKVMDYASLPHFCRKEDSRVPRQLYNYIKQQAIFISSIRQESFHVYLPEPDPDDAKIAKTIETEFHKLESQNGLTN 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2602 120 Gene3D - 2 85 IPR036865 -
Aed3g2602 120 CDD SEC14 3 56 IPR001251 -
Aed3g2602 120 Pfam CRAL/TRIO domain 3 56 IPR001251 -
Aed3g2602 120 PANTHER - 2 120 - -
Aed3g2602 120 PANTHER OS09G0258000 PROTEIN 2 120 - -
Aed3g2602 120 SUPERFAMILY CRAL/TRIO domain 3 57 IPR036865 -
Aed3g2602 120 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 1 54 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2602 Aed-Chr3 28000386 28000833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2602 1 119 Acyl Lipid Metabolism Gene Families AT5G47730 49.275 2.75e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2602 - - vra:106764338 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2602 3 28000386 28000833 Aed3g2602 3 28000386 28000833 ECH
Aed4g2357 4 25967809 25972574 Aed3g2602 3 28000386 28000833 PCT