Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2148 ATGTTAGCCCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTCAATGAAACAACGATTGAGCGTGGTGAGGAGAGAGAGGAAGAGAAAGTGGGTGGTTCAAATGCCAGTTTGAAAAACCTTCTCTGGCATGGTGGGTCTGCTTATGATGCATGGTTCAGCTGTGCCTCAAATCAGGTTGCGCAGGTTCTGCTAACACTGCCATGCTCTTTTGCTCAGTTGGGAATGCTTTCTGGCATCATATTCCAAATCTTCTATGGAATAATGGGAAGTTGGACTGCTTATCTCATTAGCATTCTGTACATCGAGTTCAGGACCAGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTGGAAGGTTTACTAGGTCCATACTGGAAAGCCATTGGCTTGGCCTTCAATTGCACTTTCCTCCTCTTTGGATCTGTTATTCAGCTTATAGCTTGTGCAAGCAACATATACCTGATAAATGACCACTTGGATAAGAGGACATGGACTTACATATTCGGAGCATGCTGTGCCACCACAGTGTTCATACCTTCATTTCACAACTACAGAATTTGGTCTTTCCTTGGCCTTGGCATGACCACATACACAGCTTGGTACATGACCATTGCAGCCATTGCTCATGGCCAGGTTGAAAATGTGACTCACTCGGGCCCAAAAACATTGGTATTGTATTTCACGGGCGCCACCAACATTCTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAAAAGTTCAAATACATCTATCTTTATGCTACTCTTTATGTATTAACACTCACCCTACCATCTGCTGTTGCCGTTTACTGGGCCTTTGGTGACCAACTCCTGGACCACTCCAATGCTTTCTCTCTTCTTCCCCACAATGGTTGGCGCGATACCGGTGTCATCTTAATGCTCATTCATCAGTTCATCACTTTTGGATTTGCTTGCACACCATTGTACTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCACTTGCTAGGTTGCCTGTGGTGATACCAATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGTCCAATTAACTCTGCTGTGGGGGCTCTTCTGGTTACCTTCACAGTCTATGTCATCCCTGCTTCTGCTCATATGCTCACTTATAGGTCTGCTTCTGCACGACAGAATGCTGCTGAGAAATTACCCATATTCATCCCAAATTGGACGTTAATGTATGTGGTGAATGCATTTGTGGTGGTGTGGGTTCTAGTGGTTGGATTTGGATTTGGAGGGTGGGCTAGCATGACAAACTTCATCAAACAGGTTGACACATTTGGACTCTTTGCAAAGTGCTACCAGTGCCCGTCAAAACTCCCAGCTTCCAACAATACAATACATCATTGA 1443 0.4463 MLAQKQGEETMMSSLNETTIERGEEREEEKVGGSNASLKNLLWHGGSAYDAWFSCASNQVAQVLLTLPCSFAQLGMLSGIIFQIFYGIMGSWTAYLISILYIEFRTRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYLINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMTIAAIAHGQVENVTHSGPKTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVLTLTLPSAVAVYWAFGDQLLDHSNAFSLLPHNGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVTFTVYVIPASAHMLTYRSASARQNAAEKLPIFIPNWTLMYVVNAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPSKLPASNNTIHH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2148 480 MobiDBLite consensus disorder prediction 1 32 - -
Aed3g2148 480 PANTHER OS05G0424000 PROTEIN-RELATED 3 470 - -
Aed3g2148 480 Pfam Transmembrane amino acid transporter protein 44 437 IPR013057 -
Aed3g2148 480 PANTHER AUXIN INFLUX TRANSPORTER 3 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2148 Aed-Chr3 25218016 25223300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2148 19 480 Organic Solute Cotransporters AT2G21050 77.204 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2148 K13946 - gmx:100817572 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2148 3 25218016 25223300 Aed2g1175 2 9883007 9887561 ECH
Aed3g2148 3 25218016 25223300 Aed3g2148 3 25218016 25223300 ECH
Aed7g2069 7 23370457 23373211 Aed3g2148 3 25218016 25223300 PCT