Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1175 ATGTTGTCTCAGAAGCAAGGAGAGGACGCAATAGTCACAAGCCTCAACCAGACACAACAACATGAAGGTGGCAGCACAAGCACAAGAGAAGAAGAAGAGGAGCAAGACCACTCCATGTTCAACTTCAAGAGCTTCCTTTGGCATGGTGGTTCTGTTTGGGATGCATGGTTCAGCTGTGCTTCAAATCAAGTGGCTCAAGTACTATTGACACTGCCATACTCGTTCGCTCAACTTGGCATGGTATCAGGCATCTTGCTTCAGATCTTCTATGGAATTATTGGAAGCTGGACTGCTTATTTAGTCAGTGTCCTCTACATAGAGTACCGCACGAGGAAGGAAAAGGAAAATGTCAGCTTCAAAAACCATGTTATTCAGTGGTTTGAAGTTCTTGATGGGTTACTTGGTCGATATTGGAAAGCAGTGGGACTAGCTTTCAACTCATGCTGTGCAACAACTGTGTTCATACCTTCCTTCCACAATTACCGAATCTGGTCTTTTTTGGGTCTTGGAATGACCACTTACACTGCTTGGTACCTTGCTATTGCAGCCATTGTCAATGGCCAGGTAGAAAATGTCACACACTCGGGTCCAACAAAGTTAATACTATACTTCACTGGAGCCACTAACATACTCTACACGTTTGGAGGACATGCTGTGACTGTAGAGATTATGCATGCGATGTGGCAGCCCCGGAAGTTCAAATCCATATACTTGCTGGCCACTTTGTATGTTTTCACTCTAACGATTCCTTCCGCCGTCGCAGTTTACTGGGCTTTCGGTGACCAGCTCCTCGACCACTCCAATGCGTTCTCTCTCCTCCCCAAGAATGGCTTCCGTGACGCCGCCGTCATCCTCATGCTCATTCACCAGTTCATAACATTTGGGTTTGCATGCACTCCGTTGTACTTCGTGTGGGAGAAGGTGATTGGAATGCACGACACAAAGAGCATTTGGTTGAGGGCACTTGCACGGTTCCCAGTGGTGCTACCAATATGGTTCTTGGCTATAATCTTCCCATTCTTTGGGCCCATAAACTCAGCCGTTGGATCTCTCCTTGTTAGCTTCACTGTCTACATCATCCCTGCCCTAGCTCATATGCTCACTTATAGAGATGCCTCTGCCAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGCTGGACTGCAATGTATGTCTTCAATGCATTCATTGTTGTATGGGTTTTGGTGGTTGGATTTGGGCTTGGAGGATGGGCCAGCATGATCAACTTGATCAACCAAATTGACACATTTGGGCTTTTTGCTAAATGCTACCAATGCCCCGAACCACCCCCACCTGCTGGTGCACCACCCCCTCTTCTTACCCATCCAGGGGTTGACCTGATAAGACCATGGTCACTTCCAAATCTATGGAACACTACTTAA 1410 0.4695 MLSQKQGEDAIVTSLNQTQQHEGGSTSTREEEEEQDHSMFNFKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFAQLGMVSGILLQIFYGIIGSWTAYLVSVLYIEYRTRKEKENVSFKNHVIQWFEVLDGLLGRYWKAVGLAFNSCCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAIVNGQVENVTHSGPTKLILYFTGATNILYTFGGHAVTVEIMHAMWQPRKFKSIYLLATLYVFTLTIPSAVAVYWAFGDQLLDHSNAFSLLPKNGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIWLRALARFPVVLPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMLTYRDASARQNAAEKPPFFMPSWTAMYVFNAFIVVWVLVVGFGLGGWASMINLINQIDTFGLFAKCYQCPEPPPPAGAPPPLLTHPGVDLIRPWSLPNLWNTT 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1175 469 MobiDBLite consensus disorder prediction 13 34 - -
Aed2g1175 469 PANTHER OS05G0424000 PROTEIN-RELATED 2 146 - -
Aed2g1175 469 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 4 145 438 - -
Aed2g1175 469 Pfam Transmembrane amino acid transporter protein 143 405 IPR013057 -
Aed2g1175 469 Pfam Transmembrane amino acid transporter protein 48 141 IPR013057 -
Aed2g1175 469 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 4 2 146 - -
Aed2g1175 469 PANTHER OS05G0424000 PROTEIN-RELATED 145 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1175 Aed-Chr2 9883007 9887561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1175 32 435 Organic Solute Cotransporters AT2G21050 71.622 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1175 K13946 - gmx:100809138 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2148 3 25218016 25223300 Aed2g1175 2 9883007 9887561 ECH
Aed2g1175 2 9883007 9887561 Aed2g1175 2 9883007 9887561 ECH