Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1701 ATGTCCCTTCGCAAGAGCCTGAGAAACCTCGTACACAATTTCAAAGACAAAGCCTCCGTGTTCGCAGCATCACTCTCTCTCAAGCGCCACGTGTCCTCCGTCCGCGTCAATGTCCTCCGTGCCACCACGCACCGCCTCTCCGCTCCGCCGTCCACGTCGCAAATCGCCGCCGTCCTCTCCGCCGGAAGGGGTTCTTATCTCCTGCCACGCACCTGCATAGACACCATCATGGACCGCCTCCATGGAACCCAAAGCGCCACGGTGGCACTCAAATGCCTCTTCGCTCTCCACAACGTTGTATCCGAGGGACCCTTAACGTTAAAGGACAACCTCTCGCACTACCCTTCGCGCGGAGGGCACAACGCCCTTAACGTTTCCACCTTCCGTGACGACACGGATGTTGAATCCTTCGAGCTCAGCGCGTGGGTTCGGTGGTACGCTAATGTTCTGGAACATATCTTAACCGTTTCGCGCGTTTTGGGTTACTATGTAACAACAACTGGCGAAGGCGCCGAAACGGGTGTGTCGAGTGACTCGAGTGGCGAGTTGTTTTGGGAAATACGAGGTCTTGTGGATTTCGTTGAGCAGGTGAGCCACGCGCCTGAGTCGTTGCACCTTCAGAGGATTGAGTTGGTGTATAACGTTGTGAGATTGGTCTGTGAGGATTATGGGCGCGTGCAGCGCGAGATTTTGCGGCGCGTGGAGGAGTGTGGAAATAGGGTGGAGGATTTGGGGGTGGACGAGTTGAAAGAGTTGATTAGTTACTTGAAGAGATTGGAGGAATGTAGAGAAAGGTTGGTGGTTTTATTTGTGAATAGGAAGTGGAACGATGCGTTTTGGGATTTGATTGGAATGGTTAAGAAGAAGGGGGTGGTGGTGATGGAGGAGGTGGAGGGGAAGTGGTTTACGGTGGTGAAGGGTAAGATTAACGAGTTGGCTGAGTCGACTCGGTTCACCAACCCGTTTCTTGAACCAGGGGAGTTTATGTATTCGGGTCCCACTGGGTGGCGCGTGGCCACGTGTCAACCTGTTTCAACGGTTGGATGA 1047 0.5387 MSLRKSLRNLVHNFKDKASVFAASLSLKRHVSSVRVNVLRATTHRLSAPPSTSQIAAVLSAGRGSYLLPRTCIDTIMDRLHGTQSATVALKCLFALHNVVSEGPLTLKDNLSHYPSRGGHNALNVSTFRDDTDVESFELSAWVRWYANVLEHILTVSRVLGYYVTTTGEGAETGVSSDSSGELFWEIRGLVDFVEQVSHAPESLHLQRIELVYNVVRLVCEDYGRVQREILRRVEECGNRVEDLGVDELKELISYLKRLEECRERLVVLFVNRKWNDAFWDLIGMVKKKGVVVMEEVEGKWFTVVKGKINELAESTRFTNPFLEPGEFMYSGPTGWRVATCQPVSTVG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1701 348 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 341 - -
Aed3g1701 348 SUPERFAMILY ENTH/VHS domain 34 162 IPR008942 -
Aed3g1701 348 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Aed3g1701 348 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 341 IPR045192 GO:0048268|GO:0072583
Aed3g1701 348 CDD ANTH_N_AP180_plant 35 157 - -
Aed3g1701 348 Gene3D - 6 163 IPR008942 -
Aed3g1701 348 Pfam ANTH domain 35 199 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1701 Aed-Chr3 21647501 21648547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1701 - - gmx:100817573 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1701 3 21647501 21648547 Aed10g0173 10 1376610 1377653 PCT