Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0173 ATGGCACAGCAAAAGCGGTTAAGAAATTTGGCTCAAAATCTCAAAGATAAAGCATCGGTGATCGCCGCAGCGCTATCCACGAAGCGCCACGTGTCTTCCGTGCGCGTCCACGTGCTCCGCGCCACCACGCACGCCCTCTCGGCGCCACCCTCGGAAGAATCCATCGCCGCGGTCCTCGCGGTGGGGCAGGGCTCCCACCACCGGCACCCGCGCGCGTGCATTGACGCGCTGATGGACCGCCTCCACAACACACGCAGTGCCACCGTGGCCCTGAAATGCCTCTACACGCTCCACAACGTGGTCGTGAAGGGACCCTTCACATTGAAGGACCAACTCTCGTGTTACCCTTCCTACGGTGGCCACAATTTTCTGAACCTCTCGACGTTCCGCGACGACTCGGACTTGGAATCGGTTGAACTCAGCTCGTGGGTTCGGTGGTACGCTGCCATGTTGGAACAGAGCCTAACGGTTTTGAGAGTCTTGGGTTATTACTTGAACGGTTCTTGCGAATCCCAAGAGCTTAGGAAGAAAAATGGTTTGGTTTTGGTTTCTGACGCACCGAATGCGGATTTATTGTACAAGCTGGAAGCTCTCGTGGGTTTCGTCGAACAAATAGGCCACGTGCCTGATTCGTTGCACCTTCAGAGAAACGAGTTGGTGTACGAGGTTGTCAGATTGGTCGGTGAGAATTATAGGAGCATACAAGGTGAGATTTTGTTGCGTGTTGAGGAACTTGGGGAAAGAATAATGAATGATTTTGATGTGGGTGAGTTGAATGAGTTGGTTGGATATTTGGGAAGATTAGAAGAGAGTTACGAAAAGTTGGTGCTTTTGTTTGTGAATAGGAGAAAGAACAATGGGTTTTGGGATTTGGTTAAGAAGACTAAGGAGAATGGTGTGGCGAAGAAGAAGGAGATTGAAGGGAAGTGGCTCACGGTGGTGGTGACGGGCAACGCCGCTGAGTTGACTCGGTGCACGAACCCGTTTCTTGACCCGGGGCAACTCAGTCCGGTCCCACGGTTAAGTTTTGCAACGGTAAGGTGA 1044 0.5239 MAQQKRLRNLAQNLKDKASVIAAALSTKRHVSSVRVHVLRATTHALSAPPSEESIAAVLAVGQGSHHRHPRACIDALMDRLHNTRSATVALKCLYTLHNVVVKGPFTLKDQLSCYPSYGGHNFLNLSTFRDDSDLESVELSSWVRWYAAMLEQSLTVLRVLGYYLNGSCESQELRKKNGLVLVSDAPNADLLYKLEALVGFVEQIGHVPDSLHLQRNELVYEVVRLVGENYRSIQGEILLRVEELGERIMNDFDVGELNELVGYLGRLEESYEKLVLLFVNRRKNNGFWDLVKKTKENGVAKKKEIEGKWLTVVVTGNAAELTRCTNPFLDPGQLSPVPRLSFATVR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0173 347 Pfam ANTH domain 35 172 IPR011417 GO:0005543
Aed10g0173 347 ProSiteProfiles ENTH domain profile. 26 165 IPR013809 -
Aed10g0173 347 SMART enth_2 32 165 IPR013809 -
Aed10g0173 347 CDD ANTH_N_AP180_plant 35 157 - -
Aed10g0173 347 SUPERFAMILY ENTH/VHS domain 34 162 IPR008942 -
Aed10g0173 347 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 338 - -
Aed10g0173 347 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 338 IPR045192 GO:0048268|GO:0072583
Aed10g0173 347 Gene3D - 5 164 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0173 Aed-Chr10 1376610 1377653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0173 - - gmx:100788852 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0173 10 1376610 1377653 Aed10g0173 10 1376610 1377653 ECH
Aed3g1701 3 21647501 21648547 Aed10g0173 10 1376610 1377653 PCT