Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1687 ATGCAGAAACGCAAGTGGATTCCGTTGGCGCTGCTGAGAAAGTTGCTCATTGCGGCCATATGCTCCATAGCGTTTGTGGCTCTCTTCTCTGTCACTCTAAACATTGTCCCTTCCTCTAAAGATCACAGGTTCAACGACAAGATCTCCACGTCTCAGGATCTGCAAAGCTGGACTCGAGAGCTCGCGCCACCTCATTTATCCAAAGCTCCACTTCCTACTCCCAAGTTGAGTGGTTCAAGAGGGAATTTGAATTACCAGAAGCTGTGGAAGCCTCCATCAAATCGTGGGTTTCTGCCCTGTACAAACCGTACACCTAATTACACCACTCCTGCCGAGTCACGAGGATATCTTTTAGTTCACACAAATGGTGGGCTCAATCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTAGCTCGAATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGGTCATTTTGGCAAGATACTAGCAATTTCTCTGATATTTTTGATGAAGAGCATTTTATGAATTCTCTAGCCAATGATGTAAAAATCATTAAGAAACTACCCAAAGAGTTGATTAATGAAACAAGAGTGGTCAAACAATTCATAAGCTGGTCTGGCATGGATTACTATGAGAATGAGATTGCTAGCCTGTGGGAAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAACCTACCTCCAGACATTCAGAAGCTTCGCTGCCGGGCTTGTTATGAAGCACTTCGCTTCTCTCCTCGCATTGAACAAATGGGAAAATCATTGGTGGAGAGGATGAGATCATTTGGTCCTTATATTGCATTGCATTTGCGTTACGAGAAGGATATGCTCGCATTTAGTGGGTGCACCCATGATTTATCTCCTTTTGAAGCTGAAGAGCTACGGTTGATCAGACATTTGAAAATTATTGCGTGCAAATCGTGTAGAGAGAACATTTCCTATTGGAAAATAAAGGACATTGATCCAATAGAACAGAGGTCAAAAGGGCTTTGCCCCTTAACTCCTAAGGAAGTTGGGATTTTTCTTACTGCTCTTGGATACCCATCAACAACTCCAATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCCCACATGGCCGAACTGCGTTCCCGATATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAGGAGCTTGAACCTTTTTCTAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGACGTATTTATACCTTCTTATGCTGGAAATATGGCAAAGGCTGTTGAGGGTCATCGCCGTTTTCTTGGACGTGGAAGAACAATATCTCCAGACAAGAAAGCCCTTGTTCGCTTGTTTGATAAACTGGATCAAGGAATAATGACCGAGGGGAAGAAACTATCAAATAGGATCATTGATCTCCACAGAAGACGACTTGGCTCTCCCAGGAAGAGAAAGGGACCAATTTCCGGAACAAAGGGCATGGACAGGTTTCGGTCAGAAGAAACCTTTTATGCTAATCCCTTGCCTGATTGTTTATGCCGGACAGAGACAGAACCACCACCTCTAAACATCTCTCACATTGTTTGA 1611 0.4302 MQKRKWIPLALLRKLLIAAICSIAFVALFSVTLNIVPSSKDHRFNDKISTSQDLQSWTRELAPPHLSKAPLPTPKLSGSRGNLNYQKLWKPPSNRGFLPCTNRTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDIFDEEHFMNSLANDVKIIKKLPKELINETRVVKQFISWSGMDYYENEIASLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEQMGKSLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSPFEAEELRLIRHLKIIACKSCRENISYWKIKDIDPIEQRSKGLCPLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYAGNMAKAVEGHRRFLGRGRTISPDKKALVRLFDKLDQGIMTEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKGMDRFRSEETFYANPLPDCLCRTETEPPPLNISHIV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1687 536 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 535 - -
Aed3g1687 536 PANTHER OS02G0726500 PROTEIN-RELATED 4 535 - -
Aed3g1687 536 PIRSF UCP009360 1 525 IPR024709 -
Aed3g1687 536 CDD O-FucT_plant 116 448 IPR024709 -
Aed3g1687 536 Pfam GDP-fucose protein O-fucosyltransferase 116 442 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1687 Aed-Chr3 21557955 21564041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1687 60 524 Miscellaneous Gene Families AT1G22460 67.957 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1687 - - gmx:100795727 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1687 3 21557955 21564041 Aed3g1687 3 21557955 21564041 ECH
Aed3g1687 3 21557955 21564041 Aed10g0184 10 1459767 1463675 PCT