Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0184 ATGCAGAGGCGCAAGACGGTTCCATTGGGCATGCTCAGAAGGTTTCTCGCGGCGTCAATATTCTCAATAGTTGTCACTTCTTTCTTCTTTGTTCACGTTCACGTTTCTCCTTCGCCCACTGATCACAAGTTCAATGATAAGATCCCCAAGTTTCGTCACCCGCAAAGCTGGACTCGAGAACTCGCTCCGCCTCATCTATCCAAAGCTCCACTCTCTGTTCCCAAGTTGAAGGATTCAAGAAAGGATTCAAACTACGAGAAACTGTGGAAGCCTCCACCAAATCATGGGTTTATACCCTGTACAAAACCTACTCCTAATTACTCAACTCCTGGAAGGTCACGTGGTTACCTTTCTGTTCATACAAATGGAGGGCTAAACCAGATGCGTACTGGGATATGTGATATGGTAGCTATAGCTCGTATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAAGTCATTTTGGCATGATACTAGCATTTTCTCTGATATCTTTGATGAAGAATGGTTTATTAGTTCTCTAGCTAATGATATAAAAATCATTAAGAAGCTTCCCAAAAGACTTGTTAATTCAACCAAAACCGTCATGCAATTCAAAAGCTGGTCTGGTATGGATTACTATGAGAATGAGATTGCTGCCTTGTGGAATAATTTCAAAGTAATTCGAGCTTCCAAATCTGATTCTCGGTTAGCAAATAACAACATACCTCCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGTTTCTCTCCTCACATTGAAAAAATGGGAAAAATATTGGTGGAGAGGATGAGGTCATTTGGCCCTTATATTGCATTACATTTACGTTATGAGAAGGATATGCTAGCATTTAGTGGGTGCACACATGAATTATCTGCATCTGAGGCTGAAGAGCTACGAATTATCAGAGAGAATACTACTTATTGGAAAAGAAAGTATATTAATCCCATAGAAGAGAGGTCCAAAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGAGTTTTTCTTTCTGCTCTTGGATACCCATCAAAGACTCCAATTTATATTGCTGCTGGGGAGATATATGGGGGTGAGTTCCATATGACTGACCTGCAATCCCGCTATCCATTGTTAATGAGCAAGGAAAAGTTGGCATCCATTGAGGAGCTTGAACCCTTTTCTAGTCATGCGTCTCAAATGGCTGCTCTTGACTATGTTGTATCAGTTGAAAGTGATGTATTTGTACATTCATACCCTGGAAACATGGCAAAAGCTGTTGAAGGCCATCGTCGTTTTCTTGGAAACGGAAGAACAATATCTCCTGATAGGCTTGGCTTCTTCAGAAAGAGAAAGGGACCCGTTTCTGGAACAAAGGGCTTGGACAGGTTTCGGTCAGAAGAAACATTTTATGCAAACCCTTTACCTGGTTGTTTATGTCGGACAGAATCACTCTTCTCAGTATAG 1461 0.4127 MQRRKTVPLGMLRRFLAASIFSIVVTSFFFVHVHVSPSPTDHKFNDKIPKFRHPQSWTRELAPPHLSKAPLSVPKLKDSRKDSNYEKLWKPPPNHGFIPCTKPTPNYSTPGRSRGYLSVHTNGGLNQMRTGICDMVAIARIINATLVIPELDKKSFWHDTSIFSDIFDEEWFISSLANDIKIIKKLPKRLVNSTKTVMQFKSWSGMDYYENEIAALWNNFKVIRASKSDSRLANNNIPPDIQKLRCRACYEALRFSPHIEKMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHELSASEAEELRIIRENTTYWKRKYINPIEERSKGFCPLTPKEVGVFLSALGYPSKTPIYIAAGEIYGGEFHMTDLQSRYPLLMSKEKLASIEELEPFSSHASQMAALDYVVSVESDVFVHSYPGNMAKAVEGHRRFLGNGRTISPDRLGFFRKRKGPVSGTKGLDRFRSEETFYANPLPGCLCRTESLFSV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0184 486 CDD O-FucT_plant 116 437 IPR024709 -
Aed10g0184 486 PIRSF UCP009360 1 448 IPR024709 -
Aed10g0184 486 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Aed10g0184 486 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 3 442 - -
Aed10g0184 486 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 442 483 - -
Aed10g0184 486 PANTHER OS02G0726500 PROTEIN-RELATED 3 442 - -
Aed10g0184 486 PANTHER OS02G0726500 PROTEIN-RELATED 442 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0184 Aed-Chr10 1459767 1463675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0184 60 481 Miscellaneous Gene Families AT1G22460 63.436 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0184 - - gmx:100807411 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0184 10 1459767 1463675 Aed10g0184 10 1459767 1463675 ECH
Aed3g1687 3 21557955 21564041 Aed10g0184 10 1459767 1463675 PCT