Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1679 ACCCTTCCCCAACTACCACCATCCCATCTTCACCAGACACACCCACACCCGTCTCCTTATAAAACCCTCACCAAACTCCCCTCTCCCTCTTCAGCCACCCCTGCAATTTCACAATCTGTGTGTGACTCCAAAAGCCTCACACCATCCGCATTACATTTCATTTCCATTAACGTCACTTTTATTGTAACAAAAACAACAATGGCAATCTCCACTTCCAACTCACTCATTCCCTCCAAATCTCTACTCCCCCAATCCCACCCCAACCCTCTCATTCCCAAAACCAACATCAGGCCCGTCCTCAAGCCCGGCCCATCCCCCTCCATCCTCGCCGTCCACGCCGCCGAGCCCGCCAAAACCCCAATTGTCGCCGACAAGCCCAAGGCGGCCCAGCCTCCATCTCCTCCCACCCCGGCCCGGGCCGGAAAATGGGCAGTGGACAGCTGGAAGTCCAAGAAGGCCCTCCAGCTCCCCGAGTACCCCAGCCAGGAGGAGCTCGAGTCCGTCCTCCGCACCCTCGACGCCTTCCCTCCAATCGTCTTCGCCGGTGAGGCCAGGACGCTGGAGGAGCATCTCGGCGAGGCCGCCTTGGGAAATGCCTTCCTCCTCCAAGGCGGAGACTGCGCCGAGAGCTTCAAGGAGTTCAATGCCAACAACATCCGTGACACCTTCCGCATCATCCTCCAGATGAGCGTCGTCATGATGTTCGGCGGCCAAGTGCCCGTCATCAAGGTGGGAAGAATGGCGGGGCAATTTGCGAAGCCGAGGTCGGATCCCTTCGAGGAGAAGGACGGCGTGAAGCTTCCGAGTTACAGAGGGGATAACGTTAACGGAGACGCCTTTAACGAGAAGTCCAGGATTCCGGATCCGCAGAGGATGATTAGGGCTTATTGTCAAGCCGCGGCTACTCTTAATCTTCTTCGAGCTTTCGCCACCGGTGGTTACGCTGCTATGCAGAGGGTTACTCAGTGGAATTTGGACTTCACTGACCACAGCGAACAGGGAGATAGGCAACTAGATGGTGCCCATGTTGAGTTCCTAAGAGGAGTTGCCAATCCCTTGGGAATTAAGGTAAGTGACAAGATGGACCCAAATGAGCTTGTTAAACTCATTGAGATCTTGAACCCCCAAAACAAACCAGGGAGAATTACTGTGATCACGAGAATGGGAGCTGAAAATATGAGGGTGAAGCTTCCACATCTCATCAGGGCAGTGCGCAGAGCAGGGCAAATTGTCACCTGGGTCAGTGATCCTATGCATGGAAACACCATTAAGGCTCCATGTGGTCTTAAAACTCGCCCCTTCGATTCCATCAGGGCTGAAGTGAGAGCATTCTTTGATGTGCATGAGCAAGAAGGAAGCCACCCAGGAGGGGTTCACCTAGAGATGACGGGTCAGAATGTGACGGAGTGCATTGGCGGGTCAAGGACGGTGACATTCGATGACTTGAGCTCACGTTACCACACACACTGTGACCCAAGGCTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATCGCTGAGCGCTTGAGAAAGACCAGGATCAGATCGCAGCAACCTATCGCCCCTCTAGGACTCTAA 1581 0.5421 TLPQLPPSHLHQTHPHPSPYKTLTKLPSPSSATPAISQSVCDSKSLTPSALHFISINVTFIVTKTTMAISTSNSLIPSKSLLPQSHPNPLIPKTNIRPVLKPGPSPSILAVHAAEPAKTPIVADKPKAAQPPSPPTPARAGKWAVDSWKSKKALQLPEYPSQEELESVLRTLDAFPPIVFAGEARTLEEHLGEAALGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMSVVMMFGGQVPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNVNGDAFNEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTDHSEQGDRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKTRIRSQQPIAPLGL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1679 526 Pfam Class-II DAHP synthetase family 336 507 IPR002480 GO:0003849|GO:0009073
Aed3g1679 526 Pfam Class-II DAHP synthetase family 143 333 IPR002480 GO:0003849|GO:0009073
Aed3g1679 526 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 336 522 IPR002480 GO:0003849|GO:0009073
Aed3g1679 526 MobiDBLite consensus disorder prediction 1 20 - -
Aed3g1679 526 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 69 336 IPR002480 GO:0003849|GO:0009073
Aed3g1679 526 Gene3D Aldolase class I 176 512 IPR013785 -
Aed3g1679 526 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 336 522 - -
Aed3g1679 526 SUPERFAMILY Aldolase 138 511 - -
Aed3g1679 526 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 69 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1679 Aed-Chr3 21509686 21514357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1679 K01626 - ini:109184823 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1679 3 21509686 21514357 Aed3g1679 3 21509686 21514357 ECH
Aed3g1679 3 21509686 21514357 Aed10g0189 10 1507700 1511082 PCT