Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0189 ATGGCGGCCACCGCTTCCAACTCTCTCATTCGCACTAAACCATTAGTCCCAACCCATTCCCTGCTTCCTTCTTCCTCCAACAACAGCAACCAATGCTCCTCCTTTCCCAGGCCCAAGCCCAGGCCCATCCAAGCCGTTCACGCCGCGGAGAACTCCGTGAATGTAGTAACCGAGAAAAAGCGCGAGACGAAGTGGGGCGTGGATAGCTGGAGGTTGAAAAAGGCCATCCAACTCCCGGAATATCCAAACAAAGAGAAGCTGGAGTCGGTACTGAAGAGCCTGGAAGCGTTCCCTCCGATCGTGTTCGCCGGAGAGGCACGGAGGCTGGAGGAGCGGCTGGCGGAGGCTTCCATGGGAAAGGCGTTCCTCCTCCAGGGCGGAGACTGCGCCGAGAGCTTCAAGGAGTTTCACGCCAATAACATCCGTGACACCTTCAGAATTCTCCTCCAGATGAGCGTCGTCATGATGTTCGGTGGCCAGATGCCCGTCATTAAGGTGGGAAGAATGGCGGGTCAATTTGCGAAACCGAGATCAGAAGCGTTGGAGGAGAAAGACGGGGTGAAATTGCCAAGTTACAGAGGAGATAATGTGAATGGGGATGTGTTCGAGGAGAAAGCCAGAACTCCTGATCCTGAAAGGATGATAAGAGCCTATAGCCAATCCGCCGCCACACTCAATCTTCTAAGGGCATTTGCCACCGGAGGATATGCTGCTATGCAAAGGGTTAGCCAATGGAATTTGGACTTCACTCACCAAAGTGAGCAAGGAGACAGGCAGCTCGATGGTGCCCATGTTGAGTTTCTCAGAGGACTTGCTAATCCCCTTGGAATTAAGGTAAGTGATAAGATGGATCCAAAGGATCTTGTTAGATTGATCGAGATCTTGAATCCCCAAAACAAACCAGGGAGAATAACTGTGATCACGAGGATGGGAGCTGAAAATATGAGGGTGAAGCTTCCACATCTGATCAGGGCAATACGCAGTGCGGGACAAATTGTTACTTGGGTCAGTGATCCTATGCATGGAAACACCATAAAGGCTCCCTGTGGACTCAAAACTCGCCCCTTCGATTCCATTATGGCGGAGGTGAAAGCATTCTTCGACGTGCATGAACAGGAAGGAAGCCACCCAGGTGGGGTTCATCTAGAGATGACGGGTCAGAATGTGACTGAGTGCATTGGTGGGTCAAGGAATGTTACCTTTGATGATCTGAGCTCACGCTACCACACTCACTGTGACCCCAGGCTTAATGCTTCACAGTCTCTTGAGCTTGCTTTCATCATTTCTGAACGCCTTAGAAAGAGGAGGATCGGATCGGATCGGAACAGTATCTTCTCTCTGTAG 1344 0.5126 MAATASNSLIRTKPLVPTHSLLPSSSNNSNQCSSFPRPKPRPIQAVHAAENSVNVVTEKKRETKWGVDSWRLKKAIQLPEYPNKEKLESVLKSLEAFPPIVFAGEARRLEERLAEASMGKAFLLQGGDCAESFKEFHANNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEALEEKDGVKLPSYRGDNVNGDVFEEKARTPDPERMIRAYSQSAATLNLLRAFATGGYAAMQRVSQWNLDFTHQSEQGDRQLDGAHVEFLRGLANPLGIKVSDKMDPKDLVRLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAIRSAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIMAEVKAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRNVTFDDLSSRYHTHCDPRLNASQSLELAFIISERLRKRRIGSDRNSIFSL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0189 447 MobiDBLite consensus disorder prediction 14 41 - -
Aed10g0189 447 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 2, CHLOROPLASTIC 19 258 - -
Aed10g0189 447 SUPERFAMILY Aldolase 56 433 - -
Aed10g0189 447 MobiDBLite consensus disorder prediction 14 37 - -
Aed10g0189 447 Gene3D Aldolase class I 98 434 IPR013785 -
Aed10g0189 447 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 19 258 IPR002480 GO:0003849|GO:0009073
Aed10g0189 447 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 258 442 IPR002480 GO:0003849|GO:0009073
Aed10g0189 447 Pfam Class-II DAHP synthetase family 65 256 IPR002480 GO:0003849|GO:0009073
Aed10g0189 447 Pfam Class-II DAHP synthetase family 258 429 IPR002480 GO:0003849|GO:0009073
Aed10g0189 447 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 2, CHLOROPLASTIC 258 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0189 Aed-Chr10 1507700 1511082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0189 K01626 - gmx:100797019 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0189 10 1507700 1511082 Aed10g0189 10 1507700 1511082 ECH
Aed3g1679 3 21509686 21514357 Aed10g0189 10 1507700 1511082 PCT