Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1661 ATGGCCATGGTTAGGTGCTTCTCTCTTTTGCCTGTGAGGAAGGAGAAACACAAGGGGAATGAAAGGTCTTCAAAAGAGGAGTTTAACACTCTACTTGCCAAACTACAATCTACAAAATTATCATCAGAGCCAACCACTTTTGATGCCATTGGTATTCAGAAAAATTATAAAGATGGAGATTCACCATTGATCAAGAGAGAACTTTCTGATTTTGATCTCAAAGGATATGATACAACAGATAAAGAGATAGGGTATCATGAAAACCAATTCAACAATGAATTGGAAGACAAAAATGACAGATACAGCCTAAAGAGTGTTGATACAACCGAAAGTGGACACATCAGTGATCCTGGAGTTGGAAAGGTTGATTCCTGGGCTTCTCCAAAGTTCAAGAGACACTTCTCCAACCTTGAAAGATTTGTCGAGCACGGGCAGATAACTCATCACTTGCCGGCTTCAAAGTTGAAGTCTTTTGAGAATTTTCAGGACTTATCAGCAATGGCTAATCTTGAAAGCCAAAGCCCCAGGTCTGTGATGAGTCACTGCAGTGCTGATAGAGTATTGCTAAAAAGGCACTCTTCAAGTCAGGTACTCCCTTCTAGAATTAAAAAATTGTGGTGGAAGATGATTTTGTGGAGCCACAGGAACATTCATAGAACTCTCTCTAGCAATTCAACACTAGTAGTTCCTACTAGTGCTGCTTTGAATAATGGATACTCCTCAGACACCACCCTTGAACCAAAACAAGGAAAGATTTTGAGGCCTGTGAAATCTTCTGATTCAATCACTATGGAATCCTTTAACAAAAGAAGCATTGGTGAAAATATTGACCAATGGATTGCTTTCTCAACAGAATCATCCTTGTTTGCAAAAGTTGATGCATGGGTGGAAGGTCTTGAAATTCAGCAGCCACTTCATGAGGATGATTTTGATGATGACAACAATGCCAGAAGCATTGTCTTCCCTCCTTCTCCTGATGCTGCTGGTGGATCAATGATGAGAACCACATCTCAGTTGACTTATCCAGAAGTCAATCTTTCAAAAGAGGCTTTAACTGCAATTAGTGTAGTTCAGTCTCTAAATCCAGCTTCTACTATTGCTCACATATCTGGGTTGTCAAGTTGTACACTTATCAAAGAGCTGTATCTTGTTGGAAATAAGATAAGTGATGTTGAAGGGCTACACAGGCTATTGAAGCTAACAGTTCTAGACTTGAGCTTCAACAAGATCACAACAACAAAAGCATTAGGCCAGCTAGTGGCTAACTACAACTCTCTTAAGGCACTTAATCTCCTTGGAAATCCGATTCAAAGTAACATCAGTGATGATCAGCTAAGCAAAGCAGTCTTTGGCCTTGTTCCAAAGCTCGTGTACCTGAACAAGCAACCTTTCAAGGCTCATAGGACACGCGAAATAGTAAGTGATAGCGTTGCCAAAGCTGCACTAGGGAACAGCACACGGAGCCGTGACAAAAGATCAGTAAGGAGAGTTGGTCATGGAGGAGTAAATGTTTCTAGAGGGACTAAAAGAAGTGCCAGCGTTTCACAGAAAAACCGGACAAGGAGGTGA 1569 0.4098 MAMVRCFSLLPVRKEKHKGNERSSKEEFNTLLAKLQSTKLSSEPTTFDAIGIQKNYKDGDSPLIKRELSDFDLKGYDTTDKEIGYHENQFNNELEDKNDRYSLKSVDTTESGHISDPGVGKVDSWASPKFKRHFSNLERFVEHGQITHHLPASKLKSFENFQDLSAMANLESQSPRSVMSHCSADRVLLKRHSSSQVLPSRIKKLWWKMILWSHRNIHRTLSSNSTLVVPTSAALNNGYSSDTTLEPKQGKILRPVKSSDSITMESFNKRSIGENIDQWIAFSTESSLFAKVDAWVEGLEIQQPLHEDDFDDDNNARSIVFPPSPDAAGGSMMRTTSQLTYPEVNLSKEALTAISVVQSLNPASTIAHISGLSSCTLIKELYLVGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLKALNLLGNPIQSNISDDQLSKAVFGLVPKLVYLNKQPFKAHRTREIVSDSVAKAALGNSTRSRDKRSVRRVGHGGVNVSRGTKRSASVSQKNRTRR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1661 522 ProSiteProfiles Leucine-rich repeat profile. 399 420 IPR001611 GO:0005515
Aed3g1661 522 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 74 371 - -
Aed3g1661 522 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 371 521 - -
Aed3g1661 522 MobiDBLite consensus disorder prediction 483 522 - -
Aed3g1661 522 PANTHER NISCHARIN RELATED 74 371 - -
Aed3g1661 522 PANTHER NISCHARIN RELATED 371 521 - -
Aed3g1661 522 ProSiteProfiles Leucine-rich repeat profile. 377 398 IPR001611 GO:0005515
Aed3g1661 522 SUPERFAMILY L domain-like 365 465 - -
Aed3g1661 522 Gene3D Ribonuclease Inhibitor 330 473 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1661 Aed-Chr3 21262578 21267628 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1661 - - gmx:100801034 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1661 3 21262578 21267628 Aed3g1661 3 21262578 21267628 ECH
Aed3g1661 3 21262578 21267628 Aed10g0198 10 1575326 1579055 PCT