Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1638 ATGAGTGTGGATCTAAAGAAAAGTGCCTCTAATGGCCAGGAGAAAATGTTACCATCACAAGAACAGCAGGCATTGATCAATGAGGTGAGAAGGTTAATTGGGCCACAGTCTGGTAAGGCATCCATTTTTTGTTCTGATGCATGCATCTCAAGGTATTTGAGGGCACGGAATTGGAATGTCAAGAAGGCAACCAAAATGTTGAAGCTGACCCTGAAATGGAGAGCAGAATACAAACCAGAAGAGATTCGCTGGGAAGATATTGCTCAAGAAGCAGAGACAGGAAAAATTTATAGAACAAATTACATTGACAAGCATGGGAGAACAGTCCTAGTAATGAGACCTAGTCACCAGAACTCAAAATCAACAAAAGGCCAAATTAAATATTTGGTATACTGCATGGAGAATGCTATTCTAAATCTTCCACCGGAACAGGAACAAATGGTCTGGTTGATTGACTTCCAGGGTTTCAATATGTCACATATATCAATAAAGGTGACACGTGAAACTGCCCATGTATTACAAGAACATTATCCTGAACGGCTGGGTCTGGCAATACTGTACAATGCACCTAAATTCTTCGAACCATTTTTCACGATGGTAAAACCCATATTAGAGACTAAGACTTATAATAAAGTCAAGTTTGGTTACTCTGATGATCAGAACACCAAGAAGATTATGGCGGATTTGTTTGATTTTGAGCATCTTGAATCTGCATTTGGTGGGAATGATGATACAGGATTTGACATAAACAGATATGCCGAGAGAATGAAAGAGGATGACAAGAAGGTTCCCGCTATCTGGACAAGGGAAAACTCTCCACCATCAGTCCCAAATCATGCTCCTTCTTTAGATTCGACTAGGTTAGAATCAGATACCGATGCTTCAGACAATGAGAAAATAAACTCTTCCCCTGTCCCCGTGATGGATACAGGTATCATTAACAATGATCAGAATATCTCAGTTAATGAAGGAGAAAGAAATGCCAATGCCAATGCAGATAAGCATTAG 1008 0.3988 MSVDLKKSASNGQEKMLPSQEQQALINEVRRLIGPQSGKASIFCSDACISRYLRARNWNVKKATKMLKLTLKWRAEYKPEEIRWEDIAQEAETGKIYRTNYIDKHGRTVLVMRPSHQNSKSTKGQIKYLVYCMENAILNLPPEQEQMVWLIDFQGFNMSHISIKVTRETAHVLQEHYPERLGLAILYNAPKFFEPFFTMVKPILETKTYNKVKFGYSDDQNTKKIMADLFDFEHLESAFGGNDDTGFDINRYAERMKEDDKKVPAIWTRENSPPSVPNHAPSLDSTRLESDTDASDNEKINSSPVPVMDTGIINNDQNISVNEGERNANANADKH 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1638 335 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Aed3g1638 335 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Aed3g1638 335 MobiDBLite consensus disorder prediction 271 288 - -
Aed3g1638 335 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 305 - -
Aed3g1638 335 MobiDBLite consensus disorder prediction 297 327 - -
Aed3g1638 335 CDD SEC14 92 242 IPR001251 -
Aed3g1638 335 PANTHER GH16843P 1 305 - -
Aed3g1638 335 SMART sec14_4 90 244 IPR001251 -
Aed3g1638 335 Pfam CRAL/TRIO domain 92 241 IPR001251 -
Aed3g1638 335 SUPERFAMILY CRAL/TRIO N-terminal domain 19 86 IPR036273 -
Aed3g1638 335 MobiDBLite consensus disorder prediction 1 21 - -
Aed3g1638 335 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Aed3g1638 335 MobiDBLite consensus disorder prediction 263 335 - -
Aed3g1638 335 Gene3D - 3 271 IPR036865 -
Aed3g1638 335 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1638 Aed-Chr3 20954600 20960245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1638 - - gmx:100780151 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1638 3 20954600 20960245 Aed3g1638 3 20954600 20960245 ECH
Aed3g1638 3 20954600 20960245 Aed10g0223 10 1804493 1805672 PCT