Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1637 ATGGCTTCTGTAGTGTATAACCAAGCAATTGGGTCTTTTCAATCCCATTCTCATACCAACAATTTTAATTATCAGCAAAAGTTTAACAATTTTGTGAGAGTGGTGGCAAAGGATTTTATAAGCAGCAATTGCTTGTCAAGAAGGGATTGTGGTGTAATTCAATCTATAGCATCTCAAACATCTGTTGCTGACACAGTTTCATCCCCTTCAAGAAGCATAACTAGAGATAGAGACACTCACAAGAAATCAAATGAGGCTTCTTTGATTCTTATTCGGCACGGTGAGTCCTTGTGGAATGAAAAGAACTTGTTCACAGGTTGTGTTGATGTCCCTCTAAGCAAGAGGGGTATAGATGAGGCAATTGAAGCTGGCAAAAGAATTAGCAGTATTCCTGTGGATCTCATATTTACATCTGCGTTGATTCGTGCGCAAATGACAGCCATGCTTGCCATGACACAGCACCGCCGCAAGAAGGTGCCTATCATAATGCACAATGAGAGTGAACAAGCAAGGGAATGGAGTCAAGTTTTTAGTGAAGACACAAAAAAGCAATCCATTCCAGTCATAGCAGCTTGGCAGTTGAATGAAAGAATGTATGGGGAACTACAGGGTCTTAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTACATGAGTGGCGTCGTAGTTACGACATGCCTCCCCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCCTATTTCAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTTCAGCTCATGGGAATTCACTGAGATCCATTATAATGTATCTTGACAAACTAACTTCCCAAGAGGTCATTAGTTTAGAATTGTCAACTGGAATTCCAATGCTTTATATTTTCAAAGAAGGAAGATTCATTAGGAGGGGAAGTCCAATAGGGCCAACTGAAGCTGGAGTTTATGCCTACACTAGGCGTTTGGCTCTTTACAGGCAGAAGTTGGATGATATGTTCCAATAA 1017 0.4041 MASVVYNQAIGSFQSHSHTNNFNYQQKFNNFVRVVAKDFISSNCLSRRDCGVIQSIASQTSVADTVSSPSRSITRDRDTHKKSNEASLILIRHGESLWNEKNLFTGCVDVPLSKRGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRRKKVPIIMHNESEQAREWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDMPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTRRLALYRQKLDDMFQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1637 338 CDD HP_PGM_like 88 307 IPR013078 -
Aed3g1637 338 PANTHER PHOSPHOGLYCERATE MUTASE 3 337 IPR005952 GO:0004619|GO:0006096|GO:0016868
Aed3g1637 338 Gene3D - 77 309 IPR029033 -
Aed3g1637 338 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 3 337 - -
Aed3g1637 338 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 90 99 IPR001345 GO:0003824
Aed3g1637 338 SUPERFAMILY Phosphoglycerate mutase-like 88 304 IPR029033 -
Aed3g1637 338 SMART PGAM_5 87 273 IPR013078 -
Aed3g1637 338 Pfam Histidine phosphatase superfamily (branch 1) 183 291 IPR013078 -
Aed3g1637 338 Pfam Histidine phosphatase superfamily (branch 1) 88 161 IPR013078 -
Aed3g1637 338 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 85 312 IPR005952 GO:0004619|GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1637 Aed-Chr3 20952378 20956549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1637 K01834 - gmx:100784422 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1637 3 20952378 20956549 Aed3g1637 3 20952378 20956549 ECH
Aed3g1637 3 20952378 20956549 Aed10g0225 10 1817289 1820619 PCT