Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1632 ATGCTGCTCGGAAAGAGACCTCGTCCGCCAATGAAGAGAACCACCAGCATGTCCGAGATAACCTCGGATCTGAACACCGCCGCCGATGCCGCCGCCAACCAACAGAAATCAGGTGTTGGTAAGGTTACAGCAGATCAGACGACAACGAGGATGTTCTCTTCACCCAAAATCCTCAGGCGACATTCCTCGGATTTCGGAGAGACGCATCACTTCCTGCGCGCGTGCAACCTCTGCAAACGCCATCTTATCCCCGGCCGCGACATCTACATGTACAGGGGTGATACTGCTTTCTGCAGTCTGGAGTGTCGCCAGCAGCAGATGAACCAGGACGAGAGAAAAGCGAAGTTTGCTATGGCGTCGAAGAAGCAAGTCGTGGTGGCTCCTCAAGTCGCCGCCGCCGCCCCCGCCACCAAGGCTGAAACCACCGTGGCTGCGTTGTAG 441 0.5669 MLLGKRPRPPMKRTTSMSEITSDLNTAADAAANQQKSGVGKVTADQTTTRMFSSPKILRRHSSDFGETHHFLRACNLCKRHLIPGRDIYMYRGDTAFCSLECRQQQMNQDERKAKFAMASKKQVVVAPQVAAAAPATKAETTVAAL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1632 146 PANTHER FCS-LIKE ZINC FINGER 5 1 145 - -
Aed3g1632 146 ProSiteProfiles Zinc finger FLZ-type profile. 70 114 IPR007650 -
Aed3g1632 146 Pfam zinc-finger of the FCS-type, C2-C2 64 113 IPR007650 -
Aed3g1632 146 PANTHER FCS-LIKE ZINC FINGER 5 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1632 Aed-Chr3 20909684 20910852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1632 - - gmx:100527853 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1632 3 20909684 20910852 Aed3g1632 3 20909684 20910852 ECH
Aed3g1632 3 20909684 20910852 Aed10g0227 10 1829523 1830612 PCT