Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0227 ATGTTGTTAGGGAAGAGACCTCGTCCTCCAATTATTAAGAGAACAACTAGCATGTCGGAAATAACCTTCGATCTGAACACGGCCTTGGACGATGATCCAAACAACCCCGCCAAGGGACCAGAAGGAGTTGGGCCAGGCCCAGGCCCATGGTCGAACTACCCACTTGATGGGTTCAACGGTTTAGATCAGAACAGGGTTTGGGCCACGGTTTCACCCAGAAACCATAGAAGGCACTCCGAGGATTCCGCACACTCCCCGGACTTCTTGCGCGTTTGCTTTCTCTGCAAACGCAGTTTAGTACCCGGCCGTGACATCTACATGTACAAAGGTGATAGTGCTTTCTGCAGTTCTGAATGCCGTCAACAGCAGATGAAGCAGGATGAGAGAAAAGATAAGTGTCGTGTGGCATCAAAGAAACAAGTTCCGCCTACTCCTAATTCCGGGTCTCAAGTTACTAAAGACGAAACCGCGGTTGCCTAA 480 0.5 MLLGKRPRPPIIKRTTSMSEITFDLNTALDDDPNNPAKGPEGVGPGPGPWSNYPLDGFNGLDQNRVWATVSPRNHRRHSEDSAHSPDFLRVCFLCKRSLVPGRDIYMYKGDSAFCSSECRQQQMKQDERKDKCRVASKKQVPPTPNSGSQVTKDETAVA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0227 159 Pfam zinc-finger of the FCS-type, C2-C2 80 130 IPR007650 -
Aed10g0227 159 MobiDBLite consensus disorder prediction 125 159 - -
Aed10g0227 159 ProSiteProfiles Zinc finger FLZ-type profile. 87 131 IPR007650 -
Aed10g0227 159 PANTHER - 1 139 - -
Aed10g0227 159 PANTHER FCS-LIKE ZINC FINGER 5 1 139 - -
Aed10g0227 159 MobiDBLite consensus disorder prediction 140 159 - -
Aed10g0227 159 MobiDBLite consensus disorder prediction 26 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0227 Aed-Chr10 1829523 1830612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0227 - - aprc:113852663 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0227 10 1829523 1830612 Aed10g0227 10 1829523 1830612 ECH
Aed3g1632 3 20909684 20910852 Aed10g0227 10 1829523 1830612 PCT